KEGG   Leminorella richardii: NCTC12151_02935
Entry
NCTC12151_02935   CDS       T05503                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
lri  Leminorella richardii
Pathway
lri02020  Two-component system
lri02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lri00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NCTC12151_02935
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    NCTC12151_02935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lri03021]
    NCTC12151_02935
Transcription machinery [BR:lri03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NCTC12151_02935
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38
Other DBs
NCBI-ProteinID: SQI43278
UniProt: A0A2X4V4Z8
Position
1:3109336..3110772
AA seq 478 aa
MKQGLQLRLSQQLTMTPQLQQAIRLLQLSTLELQQEIQTALESNPLLEQADVHDEIESRE
APETEQLDTSEALQQSDIPEDLPLDASWDEIYTAGTPSGTRNDYGDDELLVFQGETTLTL
QDHLMWQVDLTPFTDLDKAIAIAIIDAVDDAGYLTVSLEDIAESLGQEDETVELDELEAV
LKRVQRFDPVGVAARDLRECLLVQLSQLDKTTPGVAEAREIVSEHLTLLGNHDFRTLLKL
TRISESLLKEAMQLIQSLDPRPGQSIHSSESEYVIPDVLVRKVHGKWTVELNGESTPRLR
INQHYASMTNTHSASDNQYIRSHLQDAKWLIKSLESRNDTLLRVTECIVERQEAFFESGP
EFMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTESGGEASSTA
IRALVKKMISAENPAKPLSDSKIADMLAEQGMVVARRTVAKYRESLSIPPSNQRKQLI
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttacagctcaggctaagccaacagttaaccatgacgccccagctacag
caggccattcgcctgttgcagctgtcgacgcttgagctacagcaggagattcaaaccgcg
ctggaaagtaatccgctgcttgaacaggcagacgttcacgacgaaattgagtctcgagaa
gcgccagaaacagagcagcttgataccagcgaagcgctacagcagtcggatattcctgaa
gacctcccgctagacgcatcctgggacgagatctacaccgctggcaccccgtcgggtaca
cgcaacgactacggtgacgacgaactcctcgtgtttcagggtgaaaccacgctgacgctg
caggatcacctgatgtggcaagtagatctcacgcccttcaccgatctggataaagcgatt
gcgatagccattatcgacgccgttgacgacgcgggttatcttactgtttcactagaagac
atcgccgaaagtctcggccaagaagatgaaaccgtagagcttgatgagctcgaagccgtg
cttaagcgcgttcagcgcttcgaccccgtcggcgttgctgcgcgggatctgcgcgagtgc
ctgctggttcagctgtcccagctggataaaaccacgccgggcgttgccgaagcgcgggaa
atcgtctctgagcacctgactctgctgggcaatcacgactttagaacgctattaaaactg
actcgaatcagcgagtctttgctcaaagaggccatgcagctgatccaaagcctcgatccg
cgccccggccagtcgatacacagtagcgaatccgaatacgttattcccgacgttctggtg
cgaaaagtgcacggtaaatggacggtagagcttaacggagaaagcacgccgcgcctgcgc
attaatcagcactacgcatcgatgaccaatactcacagcgccagcgacaatcagtacatt
cgcagccacctccaggacgcaaaatggctgataaaaagcctggaaagccgtaacgatacg
ctcttgcgcgtcactgagtgtatcgttgagcggcaggaagctttttttgagtccggccct
gagtttatgaagccgatggtgctggcggatatagctcaggctgtcgacatgcatgaatcc
actatctcgcgggttacaacacagaaatttctacacagcccgcggggcatatttgaacta
aaatacttcttctccagtcatgtgaatacggagagcggcggcgaagcatcctctaccgcc
attcgcgcgctggtgaaaaaaatgatctcggccgaaaaccccgccaaaccgctcagcgac
agtaaaatcgccgatatgctggcggaacagggaatggtggtcgccagaaggaccgtggca
aaataccgagagtcgttatctattcctccttcaaaccagcgcaaacagctgatttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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