KEGG   Leminorella richardii: NCTC12151_03596
Entry
NCTC12151_03596   CDS       T05503                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase rhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
lri  Leminorella richardii
Pathway
lri03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCTC12151_03596 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lri03019]
    NCTC12151_03596 (rhlB)
Enzymes [BR:lri01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     NCTC12151_03596 (rhlB)
Messenger RNA biogenesis [BR:lri03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     NCTC12151_03596 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_22 CMS1 CCDC138_C
Other DBs
NCBI-ProteinID: SQI44281
UniProt: A0A2X4UZP1
Position
1:3833713..3834996
AA seq 427 aa
MSKTHLTEQKFADFALHPSVIKALESKGFHYCTPIQALALPYTVEGKDVAGQAQTGTGKT
LAFLASTFNYLLTHASDEQRKTNQPRALIMAPTRELAVQISNDAQPLADETGFKTGLAYG
GDGYDKQLKVLQSGVDILIGTTGRLIDYVKQGHVDLSAIQVVVLDEADRMFDLGFIKDIR
WIFRRMPAAEQRLNMLFSATLSFKVRELAFEHMNSPQYIEVEPEQKTGHRIKEELFYPSN
EDKMRLLQTLLEEEWPDRAIVFANTKHVCEEIWGHLAADGHRVGLLTGDVAQKKRLQILD
EFTKGNLDILVATDVAARGLHIPEVTHVFNYDLPDDCEDYVHRIGRTGRAGASGNSISLA
CEQYALNLPAIEQYIGHAIPVSRYNPDALMTDLPAPKRLPRTRAVGSQRRSSGPRRSGAP
RGRKRSG
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgagcaaaacacacttgacggaacagaagttcgccgacttcgcactacacccctcggtc
atcaaagcccttgaaagtaagggttttcattactgtacgccaatacaggcattggcgttg
ccttataccgtagaggggaaggacgttgcaggacaggcgcaaacgggtaccggaaaaacg
ctggcttttctggcatctacctttaactatttattaacgcacgcgtccgacgagcagcgc
aaaacgaatcagccgcgagcgctgattatggcgccgacgcgtgagctggccgttcagatc
agcaacgacgcccagcctctggcagatgaaaccggctttaaaaccggcctagcctatggc
ggagacggttatgacaagcagcttaaagtgctgcagtctggcgtagacattcttatcggt
acaacgggtcgtcttattgactacgtcaaacagggccatgtcgatcttagcgccattcag
gttgtcgttctggacgaagccgaccgcatgtttgacctgggctttattaaggatatccgc
tggatcttccgacgtatgcctgctgcggaacagcgcctgaatatgctgttctcggcaacg
ctctcctttaaagtcagagagctggcgttcgagcacatgaatagccctcagtatattgaa
gttgaaccagagcaaaaaaccggccaccgcattaaagaagagcttttctacccctcaaac
gaggacaaaatgcgccttctgcaaacgctgttggaagaagaatggcccgaccgcgctatc
gttttcgccaataccaagcacgtttgtgaagagatctggggccacttggcggcagatggt
catcgagtcggcctgctgactggcgatgtggcacagaaaaagcgcctgcaaattctggat
gagttcaccaagggcaatctggatattctggtcgccaccgacgttgccgctcgcggtctt
catattcctgaagtcacacacgtattcaactacgacctgccagacgactgtgaagactat
gttcatcgcatcggccgtaccggtcgcgctggcgccagcggcaactcgattagcctggcc
tgcgagcagtacgcgctgaacctacctgctatcgagcagtacatcggtcacgccattccg
gtaagccgctataacccagacgcgctaatgacagacctgcctgcgccgaaacgactgccg
cgcacgcgagctgtaggtagtcaacgacgcagcagcgggccccgtagaagcggagctcct
cgcggtcgcaagcgttcaggatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system