KEGG   Lactobacillus rhamnosus Lc 705: LC705_01479Help
Entry
LC705_01479       CDS       T00990                                 

Gene name
rluD
Definition
(GenBank) Ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
lrl  Lactobacillus rhamnosus Lc 705
Brite
KEGG Orthology (KO) [BR:lrl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lrl03009]
    LC705_01479 (rluD)
Enzymes [BR:lrl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     LC705_01479 (rluD)
Ribosome biogenesis [BR:lrl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LC705_01479 (rluD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: PseudoU_synth_2 S4 S4_2
Motif
Other DBs
NCBI-ProteinID: CAR90318
Position
complement(1481175..1482095)
Genome map
AA seq 306 aa AA seqDB search
MSDTFTITTESGRIDKIITAHETTHTRSQVQKWLQDGLVTVNGNPVKANFKVTAGDVVTV
TIPEVKPLKAVAEPIPLEIVYEDDQVIVVNKPQGMVVHPAPGHPDGTLVNGLLYHTKLPG
INGVIRPGIVHRIDKDTSGLLMVAKTEAAQLSLSAQLKAKTSIREYLALVHGTFKEDEGT
IDAPLGRDPRDRKRQAVVADGRHAVTHFQVLERFTNYTLVKCILDTGRTHQIRVHMAYIH
HPVAGDPLYGPKRTLPGHGQFLHAAKLGFVHPVTGKLLTFTAPVPPIFEKTLTDLRAGID
KTRNVR
NT seq 921 nt NT seq  +upstreamnt  +downstreamnt
atgagcgataccttcaccattaccaccgaaagcggccgaattgataagatcatcacggcc
cacgagacgacccacacccgcagccaggtgcaaaaatggctccaagacggcttggtcacc
gttaatggcaatcccgtgaaagctaattttaaggtgacggccggtgatgtcgtaacggtg
accattccggaagttaaaccactaaaggccgttgctgaaccgattcctctcgagattgtt
tacgaagacgaccaagtcattgtggttaacaaacctcaaggcatggttgttcatccggca
ccgggtcatccggacggcacgctggtgaatgggttgctgtatcacaccaagttgcctggt
attaatggcgtcattcggccgggaatcgttcatcgtattgataaagatacgagcggcttg
ctaatggttgcaaaaacagaagccgcccagctaagtctatccgcccagcttaaggctaaa
acgtcgattcgggaatatttggcactggttcatggtacgtttaaagaagacgagggcaca
attgatgcgccgttgggtcgggacccgcgcgatcgcaaacgccaagcagtggtcgcagat
ggccgccatgctgtgacccattttcaagtactggagcgctttacaaactacaccttggta
aaatgcattctggatactgggcgcacgcatcagattcgcgtacacatggcttacatccat
cacccggtagcaggcgatcctctctatggccctaagcgtacccttcctggtcatggtcag
tttcttcacgctgcaaaactcggcttcgtgcatccggtcacgggaaaattattaactttt
accgcgccggtacccccaatttttgaaaaaaccttaaccgatctgcgtgcaggcattgac
aagacccgcaacgttcggtaa

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