KEGG   Ligilactobacillus ruminis: LRC_08320
Entry
LRC_08320         CDS       T01626                                 
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
lrm  Ligilactobacillus ruminis
Pathway
lrm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lrm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    LRC_08320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lrm03400]
    LRC_08320
Enzymes [BR:lrm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     LRC_08320
DNA repair and recombination proteins [BR:lrm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     LRC_08320
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon RecJ_OB
Other DBs
NCBI-ProteinID: AEN78114
UniProt: G2SNF1
Position
883478..884815
AA seq 445 aa
MSDEKKYLTVTALTRYIKRKFTADPYMRRVYLTGEISNFRLRPKHQYFSLKDENAVIDVV
MFASDFSKVKFRPEEGMKVIVSGRVDVYEGSGKYQFYVETMEPEGIGALYQALKELQQKL
SAEGLFSAPKKPINRFPKRIAVITSRSGAVIQDIRTTIRRRYPIAQVVLFPAVVQGAQAA
DTLVARLKEVNARGDFDTIIIGRGGGSIEDLWPFNEEKVARAIFDSKIPVISSVGHETDT
TIADLVADVRAATPTAAAELATSVLSDDLAMIDQLRYRLVKSMRNRIEYLKQRFEKCRNS
YIFMQPERLYEGYLQKLDRMQNELIGLTQNKISQGKNRLTVANKVLYGRIMPDRISLLQS
ELKQDRRQLESAGISRLKNSENRFIKAKNALDMLSPLRVMGRGFTYVTQEDHVIKSVNEL
SVGEEIKLHLQDGYANASIIETEKE
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgtctgatgaaaaaaagtatctgacggttacggctctcacgcgttacatcaaacgaaaa
tttacggccgacccgtatatgcgcagagtgtatttgacaggcgaaatttccaattttcga
ctgcgtcccaaacatcaatacttttctttaaaagatgaaaatgcagtgattgacgtcgta
atgtttgcaagtgatttctcaaaggtcaagttcagacctgaagaagggatgaaagtcatt
gtcagcggtcgtgtcgacgtttatgaaggaagcggaaagtatcaattttacgttgaaaca
atggagcctgaaggaatcggtgcactgtaccaggcactcaaagaacttcagcaaaagctt
tcggcagaaggtttgttttctgcaccgaaaaagccgatcaatagatttcctaagcgtatc
gccgttattaccagccgttccggagccgtgattcaagatatcaggacgacgattcgcaga
agatatccgatcgcccaagtagtgctgtttccggcagtcgtgcaaggtgcgcaagctgct
gatacgttggtcgcacgtttgaaggaagtcaacgcaagaggagattttgacacgattatc
atcggacgagggggcggttcgattgaagatttatggccgtttaacgaagaaaaagtcgca
cgggcgatttttgacagcaagattcctgttatttcttcagtcggacatgaaaccgatacg
acgattgctgatcttgtggcagacgtcagagctgcaacaccgactgcggctgccgaactt
gcaacctcagttttaagcgatgatttggcaatgattgatcagttgcgctatcgcttggtc
aagagcatgagaaatcgaatcgagtatcttaagcaacggtttgaaaaatgtagaaattcc
tacattttcatgcagccggaacgcttgtatgaaggatatcttcaaaaacttgacagaatg
caaaatgaactgatcggtttgacgcaaaataaaatcagtcagggaaaaaatcgcttgacg
gttgcaaacaaagttttgtatggccgaatcatgcctgacaggataagcctgctgcaaagc
gaattgaaacaagacagaagacagcttgaaagcgcaggaataagccgacttaaaaattca
gagaatcgtttcatcaaagcaaaaaatgcgcttgatatgttgagtccgctgagggtgatg
ggccgcggctttacctatgtgactcaagaagatcacgtgatcaaaagcgtcaatgagctt
agcgtcggagaagagatcaaactgcatttgcaagacggatatgcaaatgcgtcaattatt
gaaacagaaaaggaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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