KEGG   Ligilactobacillus ruminis: LRC_08350
Entry
LRC_08350         CDS       T01626                                 
Name
(GenBank) Predicted rRNA methylase
  KO
K06442  23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
Organism
lrm  Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:lrm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lrm03009]
    LRC_08350
Enzymes [BR:lrm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.226  23S rRNA (cytidine1920-2'-O)-methyltransferase
     LRC_08350
    2.1.1.227  16S rRNA (cytidine1409-2'-O)-methyltransferase
     LRC_08350
Ribosome biogenesis [BR:lrm03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    LRC_08350
   23S rRNA modification factors
    LRC_08350
SSDB
Motif
Pfam: FtsJ S4 Methyltransf_25 Methyltransf_23 Methyltransf_12 Methyltransf_11
Other DBs
NCBI-ProteinID: AEN78117
UniProt: G2SNF4
Position
885944..886762
AA seq 272 aa
MKKERIDVLLVQQGLFETREQAKRAVMAGEILGENEERLDKPGMKVDPETKLHFKGTKMP
YVSRGGLKLEKALKVFHLSIKDKTVLDIGSSTGGFTDAALQKGAKMSYALDVGTNQLAWK
LRQDDRVVVMENTNFRYSKKDDFTSGQPDFATIDVSFISLHLILPNLHSIIKEGGSVVAL
IKPQFEAGREKVGKHGIVHDPKTHLEVVQDIMVFSASVGYDVCELDFSPITGGQGNIEFL
IHLKSVDGEGKIMPEVDAAAVVKQAHAVLERK
NT seq 819 nt   +upstreamnt  +downstreamnt
atgaaaaaagaaagaattgacgtcttgttggttcaacaaggcttatttgaaacgcgcgag
caggccaaacgtgcggttatggccggggagattctcggagaaaatgaagaacgtttggac
aagccgggaatgaaggttgatcctgaaacgaagcttcattttaagggcactaaaatgccg
tacgtcagtcgaggcggattgaagcttgaaaaagcgcttaaagtctttcatctttcgatt
aaggacaagaccgttttggatatcggttcttcaaccggaggatttaccgacgcagctttg
caaaagggtgccaagatgagttatgcgcttgacgttggcaccaatcagcttgcgtggaaa
ttgagacaagatgatcgggtcgtcgtaatggagaataccaatttcagatattcaaagaaa
gatgattttacaagcggtcagcctgactttgccacgattgacgtttcgtttatttctctg
catttgattttgccgaatctgcactcaatcatcaaagagggcgggagcgtcgttgctttg
atcaagcctcaatttgaagcgggaagagaaaaagtcggcaagcacggaatcgtgcatgat
cctaaaactcatttggaagtcgttcaagacataatggtcttttccgcaagcgtcggttac
gatgtttgcgaattagatttttcgccgatcaccggaggtcagggaaacatcgaatttctg
atacacctgaaatccgttgacggagagggaaaaatcatgcccgaagttgatgcagcggca
gtcgttaaacaggcacatgccgttcttgaacgtaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system