KEGG   Ligilactobacillus ruminis: LRC_12070
Entry
LRC_12070         CDS       T01626                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
lrm  Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:lrm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrm03019]
    LRC_12070
   03009 Ribosome biogenesis [BR:lrm03009]
    LRC_12070
   03036 Chromosome and associated proteins [BR:lrm03036]
    LRC_12070
Enzymes [BR:lrm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     LRC_12070
Messenger RNA biogenesis [BR:lrm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LRC_12070
Ribosome biogenesis [BR:lrm03009]
 Eukaryotic type
  90S particles
   RNase
    LRC_12070
 Prokaryotic type
  rRNA processing factors
   LRC_12070
Chromosome and associated proteins [BR:lrm03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     LRC_12070
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm
Other DBs
NCBI-ProteinID: AEN78466
UniProt: G2SPF3
Position
complement(1257304..1257996)
AA seq 230 aa
MIIGLTKKLKDDYGINVKNAELFDEAFTHASYVNEHPKEHLKYYERIEFLGDAVMQLCVS
EYLFKRYPSLPEGKLSRLRAAMVCEDSFSKFAKECHFDEYIRLGKGEEKANARNRPSLLC
DIFESFIGALYLDQGKDKVVEFISAVVFPKLDMGWFDHLLDHKTELQEYLQQNGDCKIEY
KMLDEKGPDNDKTYTMAVYADGKKIGEGVGSSKKNAEQAAAYQALKVAKQ
NT seq 693 nt   +upstreamnt  +downstreamnt
atgataatcggtttaacaaaaaaattaaaggatgattacggaatcaacgtcaagaatgcg
gaactgtttgatgaagcattcacgcatgcatcatatgtcaacgagcatcctaaagaacat
ttgaaatattatgaacgaatcgaatttcttggagatgcggtcatgcagctttgcgtttcg
gagtatttgttcaaacgttacccttctttgccggaaggaaaactttcaagactgcgcgcg
gcaatggtttgtgaagacagcttcagcaaattcgccaaagaatgtcattttgatgaatat
attcgcctgggcaaaggtgaagaaaaagccaacgccaggaatcgaccatcgcttttatgc
gatatttttgaatcttttatcggtgctctgtatttggatcaaggaaaagacaaggtcgtt
gaattcatcagtgccgttgtttttccgaaacttgacatgggctggtttgatcatcttctt
gatcataagacggaacttcaagaatatctgcaacaaaacggtgattgcaaaatcgaatac
aagatgttggatgaaaaaggcccggacaacgataagacatatactatggccgtttacgcc
gacggcaaaaaaatcggtgagggtgtcggttcctcgaaaaaaaatgctgaacaggcagct
gcatatcaagcattgaaagttgccaagcagtaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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