KEGG T06556: PX52LOC

Limnoglobus roseus: PX52LOC_02112

Entry

PX52LOC_02112     CDS       T06556

Name

(GenBank) CCA tRNA nucleotidyltransferase

K00970

poly(A) polymerase [EC:2.7.7.19]

Organism

lrs Limnoglobus roseus

Pathway

lrs03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:lrs00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PX52LOC_02112
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrs03019]
    PX52LOC_02112
Enzymes [BR:lrs01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     PX52LOC_02112
Messenger RNA biogenesis [BR:lrs03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     PX52LOC_02112

SSDB

Motif

Pfam:

PolyA_pol PolyA_pol_RNAbd tRNA_NucTran2_2

Other DBs

NCBI-ProteinID:

QEL15197

UniProt:

A0A5C1AAF3

Position

complement(2498633..2499826)

AA seq 397 aa
MTEREFATDVVRRLQAAGFRALWAGGCVRDELLGLTPADYDVASDATPEQVKGNFRRCVE
VGAAFGVIEVLGPRGDDGEWLKVQVATFRNDGHYSDGRRPDAVTFSSPEEDAQRRDFTVN
GMFFDPIANQVIDYVGGQADLRAKVLRAIGDPTARFTEDKLRILRAVRMATRFELAIDPA
TLDAARRMASQIRVVSAERIAEELRKLFAHRYRARGAELLREFGLLSPVLPEVPSPDVRL
LTALPPDSSFPLAFAAVLLPVGKKVAGNIAKRLKLSNDEKDRIEWLVDRHVGLRNAASLR
PSQRHPLLTHPGVGDLLALTRAEGFAADADFCEAILHDTPPEVLDPPPLLTGDDLVAMGW
KPGPLFKRVLETVRQKQLDGELQTAADATTFAEGMKP

NT seq 1194 nt +upstreamnt +downstreamnt
atgaccgagagagagttcgccaccgacgttgttcgacgattgcaggccgccgggttccgc
gcgttgtgggccggcggctgtgttcgtgatgagttactcggtctaacaccggccgactac
gacgtggcgtccgacgcgacaccggaacaggtgaaaggcaatttccggcggtgcgtcgaa
gtcggggcggcgttcggcgtgatcgaagtcctcgggccgcgcggcgacgacggcgagtgg
ctgaaggtgcaggtcgccacgttccgaaacgacggccactacagcgatggccgccggccg
gacgcggtgacgttcagttcgccggaagaggacgcacagcgccgcgacttcacggtcaac
gggatgttcttcgaccccatcgcgaaccaagtcatcgactacgtcggcggacaagccgac
ctgcgggcgaaggtgctgcgggccatcggcgatccgaccgcccgcttcaccgaagacaag
ctccgcatcctccgggccgtgcggatggccacgcggttcgagttggccatcgacccggcg
actttggacgcggcccggcgaatggcgtcgcagattcgcgtcgtcagcgcggagcggatc
gcggaagaactgcggaagctgttcgcccaccgctaccgtgcccgcggcgcggaactgttg
cgggagttcggcctgctgtcgccggtgttgccagaagtaccttcaccagatgtgcgattg
ctgaccgccctgccgccggactcgtcctttccgctcgccttcgccgcggtgctgctgccc
gtggggaagaaggtggcggggaacatcgcgaaacgactgaagttgtcgaacgacgagaag
gaccgcatcgagtggctggtggaccgccacgtcggcctgcgaaacgccgcgagcttgcgg
ccgagccaacgccacccgctgctgacgcaccccggcgtcggcgacctactcgcgctgacg
cgggccgaaggctttgctgccgacgccgacttctgcgaagcgattctgcacgacacaccg
ccggaggtgctggacccgccgccgctgctgaccggcgacgacctcgtcgcgatggggtgg
aagccggggccgctgttcaagagagtgctggaaacggtccgccagaagcagttggacggc
gagttgcagacggccgccgatgcgacgaccttcgcggaggggatgaagccctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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