KEGG   Limosilactobacillus reuteri I5007: LRI_0928
Entry
LRI_0928          CDS       T02701                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
lrt  Limosilactobacillus reuteri I5007
Brite
KEGG Orthology (KO) [BR:lrt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lrt03400]
    LRI_0928
DNA repair and recombination proteins [BR:lrt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LRI_0928
    Archaeal homologous recombinant proteins
     LRI_0928
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 SMC_N UDPGT AAA_21 GTP_EFTU FERM_C_FAK1
Other DBs
NCBI-ProteinID: AGN99137
UniProt: R9WJD7
Position
941027..944128
AA seq 1033 aa
MRPLTIELHYFGPYEHQVIDFTQFTERSLFLVAGNTGAGKTTIFDAMCYALFGQTTNDRD
RSAAALRSDFAPADQETMVKFTFEHQDLKYQIMRRPKQVLKGRRDNLVEHNQAVDLIYPL
ESDHPQEITKIKEADTFITDLLNLTRDQFKQIVLLPQGKFRQFLDSDSNTKETLLRDLFN
TSRYEQWATQLKNDLREQKKSLTTQETKLQSLKETVTAIDAQLTTKEWLAEAKNYLSRLK
ANLEHLGDDEQQQQKKVDQLDAQLHTEQELKKNIEELAELIKVGKTLQAQAGEIQETKQQ
VKVLEWYQEHQTEYQRWKDGEKRLQKLTLDNKFLHEDLRNLQKQQQTIETDLQQTSKQQE
EIDQLQTEVADLTNKLPFFDDRDKLRSTVDELQTHLKQQKKQQAASQKKLQDAQQQLTVI
TNNLKEHENLGEVQVHIAKQEALQEKLTTAGKDLKQLETKLLSEKKNCAKLEQKQGDAEK
LVQKSQGELDDLNDRFARHQIAILAQKLKPATPCPICGSLDHPHPASLADDGELVTEAQV
KAATVKAQQNRSRLDQLKEQVRQSVAQIANLTTQVETRQANLAELLGDNELPSDWEGQIE
SHAQKLAEMKTDLDRIEQQVKEWRQEEEKLQQESKFSQEELDKIDESVNRCKQDLIAKQT
ILKEKAASLPAKFPTKEAADKRIQTDQLKIKAFNNQLESLQQQRQENAKKLAGTNSRIDQ
TKEELATQTTQQDNLHRYLVNLLAQYDVQLKWNFWQEASEQVATLSSLREQVTTFENQVQ
DNQSQQERLTKAINSHPMPDITSTQTKLNAEREQLRQYQQEIGQLTAQYKQLEETDQKII
KAVEKTGKLDQEINELQTLTDVVTGNTENHVSLERYVLQAYFQDVLVAANIQLDRLTNSR
YQFELATESHGAGAKWSGLEVNVYDDNAGRTRSARTLSGGESFMASLALALALCQIVQEQ
SGGIKIDALFIDEGFGSLDQQALEDALHSLQELEGHRMIGIISHITELEEQIPDQLIVRS
RNGRSYVAYQHEI
NT seq 3102 nt   +upstreamnt  +downstreamnt
atgcgtccattaacgattgaactacattactttgggccgtatgagcatcaagtgattgac
tttacgcagttcacagagcgttccttatttctggtagcagggaatactggtgcggggaaa
accacgatttttgatgcgatgtgttatgcgctttttggtcaaacaaccaatgatcgtgat
cggtcggctgctgctttgcgttctgatttcgcaccagctgatcaagaaacaatggtgaag
tttacctttgaacaccaagaccttaaatatcaaattatgcgtcgtcctaaacaggtttta
aagggacgccgcgacaatttagttgaacataatcaagccgttgatcttatttacccgctt
gaaagcgatcatccccaggaaatcactaaaatcaaggaggcagacacgtttattactgac
ttgctcaatctgacccgtgatcaatttaagcagattgtccttctccctcaaggaaagttt
cggcagtttcttgattcagatagcaatactaaggaaacccttctacgtgacctctttaat
acgtcccgttatgagcagtgggcaacgcagctaaaaaatgatttgcgtgaacagaagaag
tcattgacgactcaagaaacaaaacttcaatcattaaaggaaacagtaaccgcgattgat
gcgcaattaacaactaaagaatggttagcggaagcaaaaaattacttatcccgactaaaa
gctaatcttgaacacttgggcgatgatgagcagcaacagcaaaagaaagttgatcagctt
gatgcccaacttcatactgagcaagagttgaagaagaatattgaggagttagctgaactt
atcaaggttggaaaaacactgcaagctcaagcaggagagatccaagaaacaaagcagcaa
gtaaaagtccttgaatggtatcaagaacaccagacagaatatcaacggtggaaagatggc
gaaaaacgtctccaaaaattaacgttagacaataaatttctccatgaggacctgcgcaac
cttcaaaagcaacagcaaacaattgaaaccgacctacaacaaacgagtaagcagcaagaa
gaaattgatcagcttcaaactgaggtcgccgacttgacgaataaactcccattcttcgat
gatcgagataaactaagatcaactgtcgatgaactacaaacacacttaaagcagcagaaa
aaacagcaagctgcttcccagaagaagttgcaagacgctcaacagcaattgacggttatt
actaataatttaaaagagcatgaaaacttgggtgaggttcaagttcacatagcaaaacaa
gaagctcttcaggaaaaattaacgactgctggaaaagatttaaagcaattagaaacaaaa
cttttatctgaaaagaaaaattgcgcgaaattagagcaaaagcagggggatgctgaaaaa
ctcgttcaaaaatcgcaaggtgagttggatgacttaaatgatcgctttgcccgtcaccaa
attgccattcttgctcaaaaattaaagccggccaccccttgcccaatttgtggatcactt
gaccacccccatccggcaagcttagcggatgatggtgaattggtaacggaagcgcaagtt
aaagcggcaaccgttaaagctcaacaaaaccgtagtaggcttgatcagttaaaagagcaa
gttcgccaaagcgttgcccaaattgcgaacttaacaacacaggtagaaactcggcaggca
aatttagctgaactgttaggggataatgaattaccgagtgattgggagggacaaatcgaa
agtcacgctcaaaaactagcagaaatgaagactgacctcgatagaatagaacaacaggtt
aaagaatggcgccaagaagaggaaaaattgcaacaagaatccaagttctctcaagaagaa
ttagataaaatagacgaaagtgtgaaccgctgcaaacaggatttaatcgccaagcagact
attctgaaagaaaaagcagcttctttaccagcaaaatttcctactaaagaagctgctgac
aagcgaattcaaactgatcaactaaagatcaaagcctttaataaccagcttgagtcattg
caacaacaacgacaagaaaatgccaaaaaattagcagggacaaatagtcggatcgaccag
actaaagaagaacttgccacccaaacgacgcaacaggataacttacaccgatatcttgtg
aatcttttagcccaatatgatgtccaacttaaatggaatttctggcaagaagctagtgaa
caagtggcaacattgtcatctttacgtgaacaggtaacgacctttgagaatcaagtccag
gataatcagtcccaacaagagcggttgactaaggccatcaatagtcatcccatgccagat
attacatcaacgcagacaaaacttaatgctgagcgtgaacaacttcggcaatatcagcaa
gaaattggtcagttaactgctcagtataagcaattagaagaaacggatcaaaagattatt
aaggcagtcgaaaaaactggaaaacttgatcaagaaattaatgaattacaaacattaaca
gatgttgtgactgggaataccgaaaatcacgttagcctagaacggtatgtattacaggca
tattttcaagatgtcttagtagcagccaatattcagttagaccggttaactaatagtcgc
taccagtttgaattagcaacggaaagtcatggggccggtgccaagtggagtgggctagaa
gttaatgtatatgatgataatgctggcagaacgcgaagtgcccggacgctttctggtggt
gaaagttttatggcttcgcttgctcttgctttagctctctgccagattgtccaagagcaa
agtgggggaattaagattgatgcgctctttatcgatgaaggatttggttcccttgatcag
caagctcttgaagatgctcttcattcccttcaagaacttgaaggccaccggatgattgga
attatcagtcatatcactgaacttgaggagcaaattccagatcagttaattgttcgatca
agaaatggccgtagttatgtcgcataccagcatgaaatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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