KEGG   Limosilactobacillus reuteri SD2112: HMPREF0538_21596
Entry
HMPREF0538_21596  CDS       T01551                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
lru  Limosilactobacillus reuteri SD2112
Pathway
lru03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HMPREF0538_21596 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lru03400]
    HMPREF0538_21596 (uvrB)
DNA repair and recombination proteins [BR:lru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HMPREF0538_21596 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HMPREF0538_21596 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR AAA_5 AAA_7 AAA_19 AAA_25 AAA_22 AAA_30 AAA Microtub_bd
Other DBs
NCBI-ProteinID: AEI57805
UniProt: F8DM56
Position
1614076..1616148
AA seq 690 aa
MKLRFHFILFNCDVREEFLLIYRQPDKKFELVSEYKPTGDQPQAINQLTKGIEDGEKAQI
LLGATGTGKTFTISNVIANVNKPTLILSHNKTLAGQLYGEMKKFFPHNAVEYFVSYYDYY
QPEAYVPSSDTYIEKDASINDEIDKLRHSATTSLLERNDVIVVASVSSIFGLGDPREYQN
SVLSLRVGQEIERDRLLTELVNIQFDRNDIDFQRGRFRVRGDVVEIFPASRDERALRIEF
FGDEIDRIREVDALTGEVIGDRDHVSIFPATHFMTNEEVMDRALPQIEADMKKQVKKFTD
EGKLLEAERIQQRTTYDIEMMREMGYTNGIENYSRYMDGRKPGEPPYTLLDFFPKDFLLV
VDESHQTMPQVRGMYNGDRARKQMLIDYGFRLPSALDNRPLKLPEFEQHVNQVVYMSATP
GPYEMEQTDHVAQQIIRPTGLLDPTVEVRPVMGQIDDLVGEINKRIEKNERVFVTTLTKK
MSEDLTDYLKDMGLRVKYLHSDIKTLERTQIIRDLRLGKFDVLVGINLLREGLDVPEVSL
VAILDADKEGFLRNERSLIQTIGRAARNENGAVIMYADTVTDSMQKAMDETKRRRTIQMK
YNEEHHITPHTIIKPIQEAITVTKKATDEAEADNSAEFTDKDFAKLDKEAQAKMLDELTE
QMRSAAKRLDFEQAATLRDTIMELKTKAKK
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgaagttgcgattccactttattttatttaactgcgacgtaagggaggaatttcttttg
atttaccggcaaccagataaaaaatttgaactagtgtcagagtacaaaccaaccggcgat
cagccccaagcaattaatcaattgacaaaggggattgaagatggtgaaaaagctcaaatc
ttattaggagcaacaggaacaggaaaaacatttacaatctcaaatgtgattgccaatgtt
aataagccaactttgattctttcccataataaaactttagctggacagctctatggtgaa
atgaaaaaattcttccctcacaatgcggttgaatattttgtttcctactatgactactat
caaccggaagcatatgttccatctagtgatacttatattgaaaaagatgcgtcaattaat
gatgagattgataagctgcggcactctgccaccacttccttactggaacgaaatgatgta
attgtcgttgcctctgtttctagtatttttggattaggggatcctcgagaataccaaaat
agtgttctttctttgcgcgttggtcaagagattgaacgtgatcgattgttgaccgaactg
gttaatattcaattcgatcgcaatgatattgattttcaacgggggcgtttccgcgttcgt
ggcgatgtagttgaaatctttccggcgtcgcgtgatgaacgagcattgcgaattgaattc
tttggggatgagattgatcggattcgtgaagttgatgcgctgacaggcgaagtgattggt
gaccgggaccatgtttctatcttcccggctactcactttatgactaatgaagaagtcatg
gatcgggcattgccacaaattgaagctgatatgaagaaacaagtaaagaagtttactgat
gagggaaagcttcttgaagcagagcgaattcaacaacggacaacttatgatattgaaatg
atgcgtgagatgggctatacaaatggaattgagaattattcgcgttacatggatggtcga
aagcctggcgaacctccctataccttattagatttcttccctaaagatttcttattagtt
gttgatgaatcccaccaaaccatgccgcaagtacggggaatgtataacggggaccgagcg
cggaaacaaatgttaattgattatgggttccgcttaccaagtgctcttgacaatcgacca
ttaaaactaccagaatttgaacaacatgttaatcaagttgtatatatgtctgcaacccca
ggcccatatgaaatggaacagacagaccacgttgctcagcaaattattcgaccgactggg
ttacttgacccaacagttgaggttcgcccggtaatgggacagattgacgacctagttggt
gaaattaacaaacgtattgagaaaaatgaacgtgtttttgttacgaccctgacgaaaaag
atgtccgaagaccttactgattatctaaaagatatggggttaagggtcaaataccttcat
agtgatattaagactcttgaacgaacgcaaatcattcgtgatctccgtcttggtaaattt
gatgttcttgttggaattaacctcttgcgggaagggctagacgttccagaagtatccttg
gtcgccattcttgatgccgataaggaaggctttttacgtaatgaacgttcacttattcag
acgattggtcgcgcggcccggaatgagaatggggcagtaattatgtatgctgataccgtg
actgactcgatgcaaaaggcaatggatgaaacaaagcggcgacggacgattcagatgaaa
tacaatgaagaacatcatattacgccgcatacaatcatcaagccaattcaagaagcaatt
actgttactaagaaagcaacggatgaagctgaagcagataacagtgctgaatttactgac
aaagattttgcaaagctagataaagaggcccaagcaaagatgctggatgaattaacagag
caaatgcgctctgctgctaaacgccttgactttgaacaggctgctacgcttcgtgatacg
ataatggaattaaagacaaaagcaaaaaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

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