KEGG   Luteibacter rhizovicinus DSM 16549: BJI69_05955
Entry
BJI69_05955       CDS       T04563                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
lrz  Luteibacter rhizovicinus DSM 16549
Brite
KEGG Orthology (KO) [BR:lrz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lrz03032]
    BJI69_05955
   03400 DNA repair and recombination proteins [BR:lrz03400]
    BJI69_05955
Enzymes [BR:lrz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BJI69_05955
DNA replication proteins [BR:lrz03032]
 Prokaryotic type
  DNA Topoisomerases
   BJI69_05955
DNA repair and recombination proteins [BR:lrz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BJI69_05955
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim HC2
Other DBs
NCBI-ProteinID: APG03504
UniProt: A0A0G9HD66
Position
complement(1294976..1297519)
AA seq 847 aa
MAKNLLIVESPAKAKTINKYLGPDFQVLASYGHVRDLRPKEGAVDPDHGFAMAYEVIDRN
EKHVDAIAKAAKAASSIYLATDLDREGEAISWHISEILRERGLLEGKDVQRVVFSEITPR
AIKEAVANPRKLSHDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
ERELEIEAFTAREYWTIQANMAHPQGDFDARLVKLDGKKFEQFDLTNEADATAARAALEK
AAAGKFTVGEVTSRERKRRPAPPFTTSTLQQEAARKLGFSTSRTMRVAQGLYEGVSLGSE
GNVGLISYMRTDSVALSDDAVSELRELIAREYGKGALPDAVQVYKSKSKNAQEAHEAIRP
TSAMHMPRTVASFLNDDQRKLYELIWKRTVACQMVHATLNTVSVEFPVEQSAFRATGTTV
IDPGFLAVYEEGKDQKNEDDDEQRRLPRLAQGDVVPVAAVVADQHFTEPPPRFSEASLVK
TLEEYGIGRPSTYASIIQVLLSREYVLLESRRFRPTDVGRAVSQFLSGHFAQYVDYDFTA
RLEDELDAVSRGEEAWVPLLERFWLPFKTLVDDKTESVDRNEATGARELGEDPKSGKPVS
VRLGRYGAYAQIGSKDDEAKPTYASLRPGQSMHTITLEDAMELFKLPRNLGQSEAGEDIT
VGVGRFGPFVKQGSTYASLKPEDDPYTIELPRALQLVQEKLEAIANRIIADFGNDIQVLN
GRYGPYITDGEKNARIPKDREPKTLTLPECVELLAAAPVKKPRGGKAAKKTATKKAAAKK
AATKKAAAPKDATAKKTAVKKTAVKKTATKKAATKKTAAKKTAVKKAAAKKAPAKSAAAK
AVSPSVD
NT seq 2544 nt   +upstreamnt  +downstreamnt
atggctaagaacctcctcatcgtcgaatcgccggccaaggccaagacgatcaacaagtac
ctggggcccgacttccaggtgctggcgtcgtatggccacgtgcgcgacctgcgaccgaag
gagggcgcggtcgatcccgatcacggcttcgccatggcctacgaggtcatcgatcgcaac
gagaaacacgtcgacgccatcgccaaggcggccaaggcggcgtccagcatctatctcgcg
accgacttggatcgcgaaggtgaggcgatctcctggcacatcagcgagatcctccgcgag
cgcggcctgctcgagggcaaggacgtccagcgtgtggtcttcagcgagatcacgccgcgc
gccatcaaggaagccgtggccaacccgcgcaagctgtcccacgacctcgtggacgcccag
caagcccgccgcgccctcgactacctggtcggcttcaatctgtcgccggtgctctggcgc
aaggtgcagcgcggcctgtccgccggccgcgtgcagtcgccggccctgcgcatgatcgtc
gagcgcgagctggagatcgaagccttcacggcacgcgagtactggaccatccaggccaac
atggcccacccgcagggcgacttcgacgcccgcctggtcaagctcgacggcaagaagttc
gaacagttcgacctgaccaacgaggccgatgccacggccgcacgcgcggcgctggagaag
gctgccgccggcaagttcaccgtgggcgaagtgaccagccgtgagcgaaagcgccgtccg
gcgccgccgttcaccacctccacgttgcagcaggaggccgcgcgcaagctcggcttctcg
accagtcgcaccatgcgcgtggcccagggcctctatgagggcgtgtcgttgggtagcgag
ggcaacgtcggcctgatcagctacatgcgtaccgactcggtggccctgtccgacgacgcc
gtgtccgaactgcgcgagctgatcgcgcgcgaatacggcaagggcgccttgcccgacgcc
gtccaggtctacaagtccaagtcgaagaacgcccaggaagcgcatgaggcgatccgcccc
acctcggccatgcacatgccgcgcaccgtggcgtcgttcctcaacgacgaccagcgcaag
ctttacgaactgatctggaagcgcaccgtcgcctgccagatggtccacgccacgctcaac
acggtctcggtggagttcccggtcgagcagtcggcattccgcgccaccggtaccaccgtg
atcgatccgggcttcctcgccgtctacgaggaaggcaaggatcagaagaacgaggacgac
gacgagcagcgtcgcctgccgcgcctggcccagggcgatgtcgtgcccgtcgctgccgtc
gtggccgaccagcacttcaccgagccgccgccgcgcttctccgaagccagcctggtcaag
acgctcgaggaatacggcatcggccgcccgtccacgtatgcaagcatcatccaggtgctg
ctcagccgtgagtacgtgctgctggaaagccgccgcttccgtccgaccgacgtcggtcgc
gccgtgagccagttcctctccggccacttcgcgcagtacgtggattacgacttcaccgcc
cgcctcgaagacgagctggacgcggtgagtcgtggcgaagaagcctgggtgcccctgctc
gagcgcttctggctgccgttcaagaccctggtggacgacaagaccgaatcggtcgatcgc
aacgaggccaccggcgcgcgcgaactgggcgaagaccccaagagtggcaagccggtctcg
gtacgcctgggtcgctacggcgcctacgcgcagatcggcagcaaggatgacgaggccaag
ccgacctacgccagcctgcgccccggccagagcatgcacacgatcacgctcgaggatgcg
atggagctgttcaagctgccgcgcaacctcggtcagtccgaggcgggtgaggacatcacc
gtcggcgtcggtcgcttcggtcccttcgtgaagcagggcagcacgtatgcctcgctcaag
cccgaagacgatccgtacaccatcgagctgccgcgcgcgctccagctggtgcaggagaag
ctcgaggccatcgccaaccgcatcatcgccgacttcggcaacgacattcaggtgctcaac
ggtcgctacggtccgtacatcaccgacggcgagaagaacgcgcgcattcccaaggaccgc
gagccgaagacgctgaccctgcccgagtgcgtcgagctcctggcggccgcgccggtgaag
aagccgcgtggcggcaaggcggcgaagaagacggccaccaagaaggccgcggccaagaaa
gcggcgaccaagaaggccgccgcgccgaaggacgccacggccaagaagacggccgtaaag
aagacggcggtcaagaagacggcaacgaagaaagcggcgacgaagaagacggcagcgaag
aaaaccgccgtgaagaaagccgccgccaagaaggcgcctgccaagtccgcggccgccaag
gcggtatccccgtccgtcgactga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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