KEGG T04563: BJI69

Luteibacter rhizovicinus DSM 16549: BJI69_14800

Entry

BJI69_14800       CDS       T04563

Name

(GenBank) excinuclease ABC subunit A

K03701

excinuclease ABC subunit A

Organism

lrz Luteibacter rhizovicinus DSM 16549

Pathway

lrz03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:lrz00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BJI69_14800
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lrz03400]
    BJI69_14800
DNA repair and recombination proteins [BR:lrz03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BJI69_14800
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BJI69_14800

SSDB

Motif

Pfam:

ABC_tran UvrA_DNA-bind nSTAND1 SMC_N DnaJ_CXXCXGXG AAA_16 AAA_29 AAA_21 RsgA_GTPase DUF5351

Other DBs

NCBI-ProteinID:

APG05038

UniProt:

A0A0G9HCJ2

Position

complement(3243848..3246484)

AA seq 878 aa
MKKRTVSPAAVPGNGFVRVRGAREHNLKNIDVAVPRDALVVFSGVSGSGKSSLAFGTLYA
EAQRRYFESVAPYARRLIDQVGVPDVDEIEGLPPAVALQQQRGTPGTRSSVGSVTTLSSL
VRMLYSRAGSYPAKQPMLFAEDFSPNTPQGACPNCHGLGRVYEVTEQTMVPDPSLTIRER
AIASWPPAWHGQNLRDILVTLGYDVDVPWRDLPKKQRDWILFTEEQPVAPVYAGFTPAET
RAALKRKTEPSYMGTYMGARRYVLHTFATTQSPLMKKRVSRFMIGSLCPVCDGKRLKREA
LSVTFAGVDIGSLSAMSFDRLVETLRPAAEGRFGEPTAGGKTTQSRAAGKRDIARRVAAG
GLGHEGSSDVRRTPNLSEEKRIAAQRIAQDLIARIGTLQSLGLGYLSMDRSSPTLSPGEL
QRLRLATQIRSNLFGVVYVLDEPSAGLHPADGEALFNALGQLKASGNSIFVVEHDLDMMR
RADWLVDVGPDAGEKGGEILYSGPPTGLAKVAASHTARYLFGDAGVAKRTAREPRGWLEL
RNVTRNNLHRLTARFPLGVFTSVTGISGSGKSSLVSQALVELLGEHLGHEPRVAEDENDD
LEPSVITRTTGHIHSGADAITRLIQVDQKPIGRTPRSNLATYTGLFDHVRKLFASTKAAK
SKRYDAGRFSFNVAKGRCETCEGEGFVSVELLFMPSVYAPCPTCHGARYNEQTLAVRWND
RNIAEVLGMTVDEACAFFADEANVLKSLLLLRDIGLGYLRLGQPATELSGGEAQRIKLAT
ELQRAQRGSSVYVLDEPTTGLHPSDVDKLVAQLQGLVDAGNTVIVVEHEMRVVAGSDWVI
DVGPGAGDQGGRIVAAGTPRDVALSKESRTAPYLAPLL

NT seq 2637 nt +upstreamnt +downstreamnt
atgaagaaacgaacggtctctcccgccgccgtgcccggcaatggcttcgtccgggttcgc
ggcgcccgcgaacacaacctcaagaacatcgacgtggccgtgccacgcgatgcgctggtg
gtgttttccggcgtctcgggctccggcaagtcctcgctggccttcggcacgctatacgcg
gaggcacagcggcgctacttcgagtccgtggcaccgtacgctcgccgcctgatcgaccag
gtgggtgtgcccgacgtggacgagatcgaaggcctgccacccgccgtggcgctgcagcaa
cagcgcggcacaccgggcacgcgctcatcggtcggcagcgttaccacgctttccagcctg
gtacgcatgctctattcgcgtgcaggcagctatccggcgaagcagccgatgctgttcgcc
gaggacttttcgcccaataccccgcagggtgcgtgcccgaactgccatggcctcggtcgg
gtctacgaagtcaccgagcagacgatggtgccggacccttcgctgaccatccgcgaacgc
gccatcgcttcctggccgcccgcgtggcacggacagaacctgcgcgacatcctggtcacc
ctgggctacgacgtggacgtgccctggcgcgatctgccgaagaaacagcgcgactggatc
ctcttcaccgaggagcaaccggtcgcgccggtgtacgcgggattcacgcctgccgagaca
cgcgcggcactgaagcgcaagaccgaaccgagctacatgggtacctacatgggtgcccga
cgctacgtgctgcacaccttcgcgacaacgcaaagcccgttgatgaagaagcgcgtatcg
cgtttcatgatcggcagcctctgtccggtctgcgacggcaagaggctcaagcgtgaggcg
ctgtcggtcaccttcgcgggcgtcgacatcggcagtttgtccgcgatgtcgttcgatcgc
ctggtggagacgctccgtccggcggccgagggccgtttcggtgaacccaccgccggcggc
aagacgacgcagagtcgcgccgcgggcaagcgcgatatcgcgcgccgggtggccgctggc
ggcctgggccacgaaggctcctcggacgtgcggcgcacgccgaacctctcggaagagaag
cgtatcgccgcgcaacgcatcgcccaggatctcatcgcacgcatcggcacgctgcagtcg
ctcggactcggctacctgtcgatggaccgcagcagccctaccctttcgccgggcgagctg
cagcgcttgcgccttgccacgcagatacgcagcaacctgtttggcgtggtgtatgtgctc
gacgaaccctccgccggactgcaccctgccgacggtgaagcgctattcaatgcattgggg
caattgaaggcgtcgggaaactcgatctttgtcgtcgaacatgatctcgacatgatgcgc
cgcgccgactggctggtcgatgtgggtccggatgcgggcgagaagggtggtgagattctc
tacagcggcccaccgaccggactggccaaggtggccgcttcgcataccgcacgttatttg
ttcggcgacgccggcgtcgcaaaacgcacggctcgcgagccacgcggctggctcgagctg
cgcaacgtgacgcgcaacaacctgcatcgcctgacggcacgtttcccactcggtgtcttt
acgtcggtgacgggcatttccgggtcgggcaagtcgagcctggtcagccaggcgctggtg
gaactgctcggcgaacaccttggccacgagccgcgcgtggccgaggacgagaacgacgac
ctcgagcccagcgtcatcacccgcacgaccggccacatccattcgggtgccgacgccatc
acccgcctcatccaggtcgaccagaagccgatcggacgtacgccacgctccaaccttgcg
acgtacacgggattgttcgaccacgtgcgcaagctgttcgcatcgaccaaagcggcaaag
tcgaagcgttatgacgcgggccgcttctccttcaacgtggccaagggtcgctgcgaaacc
tgtgagggcgaagggttcgtcagcgtcgagctgctgttcatgccgagtgtctatgcgccc
tgcccgacctgtcacggcgcgcgctacaacgagcagaccctggccgtccgctggaacgac
aggaacatcgccgaggtgctcggcatgaccgtggatgaagcctgcgcgttcttcgccgac
gaagccaacgtgttgaagtcactccttcttcttcgcgacatcggcctgggctacctgcgt
ctgggccagccggcaaccgagctctcaggtggcgaagcccagcgcatcaagctggcgacc
gaactgcaacgcgcccagcgcgggagcagcgtgtatgtcctggatgaacctacgacgggc
ctgcatccttctgacgtcgacaagctcgtcgcgcagttgcagggcctcgtcgacgcaggc
aataccgttatcgtcgtcgagcacgaaatgcgcgtcgtcgccggtagcgactgggtgatc
gatgtgggccccggcgcgggcgaccagggcggacggatcgtcgccgccggtacgccgcgc
gatgtcgcgctctcaaaggagagtcgtaccgccccctacctcgccccgctcctgtag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (25)   

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