KEGG   Latilactobacillus sakei subsp. sakei: LCA_1552
Entry
LCA_1552          CDS       T00299                                 
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lsa  Latilactobacillus sakei subsp. sakei
Pathway
lsa03420  Nucleotide excision repair
lsa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LCA_1552 (pcrA)
   03430 Mismatch repair
    LCA_1552 (pcrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsa03400]
    LCA_1552 (pcrA)
Enzymes [BR:lsa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LCA_1552 (pcrA)
DNA repair and recombination proteins [BR:lsa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LCA_1552 (pcrA)
   MMR (mismatch excision repair)
    Other MMR factors
     LCA_1552 (pcrA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 Viral_helicase1 AAA_11 AAA_12 AAA_22 FWWh ResIII
Other DBs
NCBI-ProteinID: CAI55859
UniProt: Q38VC4
Position
complement(1523766..1526015)
AA seq 749 aa
MSEQELLKGMNPEQAEAVLTTEGPLLIMAGAGSGKTRVLTHRVAYLIEEKHVLPWRILAI
TFTNKAAREMRERVGNLLGEGAQDVWVSTFHALCVRILRREIEQIGYNRAFTIADPSEQL
TLMRHVCRDLNIDTKKYEPKAILGTISKAKNALQTPADYQGLANGPFEKMAAKCYTEYQK
RLHQNQALDFDDLIMQTIRLFRENKETLAHYQEKFQYIHVDEYQDTNEAQYTLVNMLAEK
YQNLCVVGDADQSIYGWRGADISNIMNFEHDYPDAKSVMLEQNYRSTKTILEAANGVINR
NTFRKPKELWTQNEEGQPITYYRGQSERDESLFVITKIQEEMQKNHRKYGDFAVLYRTNA
QSRTIEEAFVKANMPYKMVGGHKFYDRKEIKDILAYLRLVVNAADSMSFERIVNSPKRGI
GPGTLEKLGQFADDHQWSLLEAAQNAELSTIPARSRNTLIDFGNVIGDLAKMREFLNVTD
LTEQLLDKTGYKKALEVENTLESQTRLENIEELLSVTKQFDEHYEPEEEDSDLFVDFLAE
LSLVSDLDSVEEEASEVTMMTLHAAKGLEFPVVFLMGMEEGIFPLSRALLEEDELEEERR
LAYVGITRAESKLYLTNAYSRMLYGRQQSNQASRFVGEIDDQLLDYANGNAGSIPERKLP
FGKSNSYARATATTYNGPKTTTSHKIADTTGGDKSGSWQAGQKVQHKKWGIGTVVKVNGT
GSDQELDIAFKEQGVKRLLASFAPIEKVE
NT seq 2250 nt   +upstreamnt  +downstreamnt
ttgtctgaacaagagctcttaaaaggaatgaatcccgaacaagctgaggcggtgctaaca
actgaagggccactgttaattatggcgggtgccggcagtggtaaaacgcgggtgttaacg
caccgtgttgcgtatttaattgaagaaaaacatgtattgccatggcgaattttagccatc
acttttactaataaagcagcgcgcgaaatgcgtgaacgggtgggcaatttactaggcgaa
ggtgctcaagatgtttgggtttcgaccttccatgccctttgtgtgcggattttacgacgt
gaaattgaacaaatcggctataaccgggccttcacgattgcggatccttctgaacaattg
acgttgatgcgccatgtttgtcgggatttaaatatcgatactaaaaaatatgaacccaaa
gcaattttagggaccattagtaaagcgaaaaatgcgcttcaaacaccagctgactatcaa
gggctagccaatgggccatttgaaaagatggcggccaaatgctatacagaataccaaaaa
cgactccatcaaaaccaagcgcttgattttgatgatttaatcatgcaaacaattcgctta
tttagagaaaataaggaaactttggcacactaccaagaaaaattccaatacattcacgtt
gatgaatatcaagataccaatgaagcccaatacacattggtgaatatgttagctgagaag
tatcaaaatctctgtgttgttggggatgccgatcaaagtatttatggttggcggggtgct
gatatcagcaatatcatgaacttcgaacatgattacccagacgctaaatcagtcatgttg
gaacaaaattaccgatcaaccaagactattttggaagctgctaatggcgtcattaatcgc
aatactttccggaaaccaaaggaattgtggacccaaaatgaagaaggccaaccgattacg
tattatcggggccagagtgaacgtgacgaatctttatttgtcatcacgaagattcaagaa
gaaatgcaaaaaaatcaccgcaagtatggcgattttgcagtgctatatcggactaatgcg
caatcacggacaattgaagaagcgtttgttaaagctaacatgccttataaaatggtcggc
ggacacaaattctacgaccggaaagaaattaaggatatcctcgcttatttacgtttagtg
gttaatgcggccgattcaatgagttttgaacggatcgtcaacagccctaaacgggggatt
ggcccgggcacgcttgaaaaattaggccagtttgccgatgatcaccaatggtcattatta
gaagcggcacaaaatgctgaattatcaacgattcccgctagaagtcgcaatactttaatc
gactttgggaatgtcattggtgatttagcgaagatgcgtgaattcttaaacgtgacggac
ttgactgaacaattattggacaagactgggtacaagaaggcacttgaagttgaaaataca
ctagaatcacaaacgcgtttagaaaatattgaagaattactatctgtaacgaaacaattt
gatgagcattatgaacccgaagaagaagatagtgatttatttgtggacttcttagcggaa
ttatcattagtctctgatttggattctgttgaagaagaagctagtgaagtcacgatgatg
accttgcatgcggctaaaggccttgagttcccggtggtctttttaatggggatggaagaa
ggtattttcccactatcacgcgcgttattagaagaagacgagttagaagaagaacgacgt
ttggcgtatgttgggattacccgtgctgaaagtaagctttatttaacgaatgcatactca
cggatgttgtacggtcgtcaacaaagtaatcaggcctcccgatttgtcggcgaaattgac
gatcagttattggattatgcaaacggtaatgccggtagtattcccgaacgtaaattacca
tttggcaagtcaaatagctacgccagagcaactgctacgacgtataatggccctaaaacc
acgactagccataaaatcgctgacacaaccggtggcgataagagtggtagttggcaagca
ggccaaaaagtccaacataagaagtggggcattggcacagtcgtcaaggttaacggcaca
ggcagcgatcaagaactagacatcgccttcaaggaacaaggtgtcaagagactactagca
agcttcgcaccaatcgaaaaggtagaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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