KEGG   Litorilituus sediminis: EMK97_15785
Entry
EMK97_15785       CDS       T05852                                 
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
lsd  Litorilituus sediminis
Pathway
lsd00730  Thiamine metabolism
lsd01100  Metabolic pathways
lsd01240  Biosynthesis of cofactors
lsd04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:lsd00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    EMK97_15785 (thiI)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    EMK97_15785 (thiI)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lsd03016]
    EMK97_15785 (thiI)
Enzymes [BR:lsd01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     EMK97_15785 (thiI)
Transfer RNA biogenesis [BR:lsd03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    EMK97_15785 (thiI)
SSDB
Motif
Pfam: ThiI THUMP Rhodanese QueC LPD3 tRNA_Me_trans
Other DBs
NCBI-ProteinID: QBG37082
UniProt: A0A4P6PBK3
Position
3557976..3559430
AA seq 484 aa
MKFIVKLQAEITIKSRPVRKRFTKILESNIKNVLRRVDEQVTTRMNWDNVEVNTKDNSPE
NRERLVDALKSIPGVPMFLEVQQTPFTDLHDIFEKTLAVHAKTIENKSFCVRVKRTGSHD
FNSLKIEQYVGGGLNQAVDSARVQLRKPEVTIRLEVKNNDLFIVTERHQGLGGFPIATQE
DVLSLMSGGFDSGVASYQMIKKGSRTHYCFFNLGGSAHEVGVKQVSYYLWNKFGASHRVK
FFAVDFEPVVAEILEKVENGQMGVVLKRMMMRAAAKVAEKAKIQALVTGESLGQVSSQTL
TNLNVINRVTDTLILRPLAAYDKQDIIDIARDIGTEDFAKTIPEYCGVISKKPTVKAVLS
KVEAEEDNFDFTILDKVVAETRVLDIRDIGKETEEEVRAVEQVEHIAENAVVLDIRSPEE
EDENPLEIDGVDVKHIPFYKLATQFGDLDMSKEYLLYCDHGVMSKLQALYLHDNGFNNVK
VYRP
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgaaatttatcgttaagcttcaagcagagatcaccattaaatctcgccctgttcgtaaa
cgttttactaagatacttgagtcaaatattaagaatgttttacgtcgtgttgatgagcag
gtaactacacgtatgaattgggataatgttgaagtgaatactaaagacaatagtcctgaa
aaccgtgaacgtttggttgatgctttaaaaagtattccgggcgtacctatgttcttagag
gtgcaacaaactccttttactgatttacatgacatttttgagaaaacgttagctgttcat
gcaaaaactattgaaaataaaagtttttgtgttcgtgttaagcgcacaggtagccacgac
tttaactcgcttaaaattgagcaatatgttggcggtggtttaaatcaagcggttgattct
gcccgagttcagcttcgtaaacctgaagtaaccattcgtcttgaagtgaaaaataatgac
ctatttattgtaactgagcgtcaccaaggcttaggtggtttccctattgccacgcaagaa
gacgttttatctttgatgtcaggtggctttgattctggtgttgctagctaccaaatgatc
aaaaaaggctctcgtacccattactgtttctttaacttaggcggttctgcacatgaggtt
ggtgtaaagcaggtgagttattatttatggaataagtttggcgcatcacaccgagtgaag
ttttttgctgttgattttgagcctgttgttgctgaaattttagagaaagtagaaaacggc
caaatgggcgttgtcttaaaacgtatgatgatgcgtgccgctgcgaaagtagctgaaaaa
gcaaaaatacaagccttagttaccggtgaaagtttagggcaagtctctagtcaaacctta
acaaatttaaatgtaattaatcgcgttaccgataccttaatattaagaccgctagcggct
tacgataagcaagatattattgatatagcacgtgatattggtactgaagattttgcgaaa
actattcctgagtactgtggtgttatttcaaagaaaccaacggtaaaagcggttttatct
aaagttgaagcagaagaagataatttcgattttactattctagataaggttgttgcagaa
acacgcgtattagatattcgtgatataggtaaagaaaccgaagaagaagtgcgcgcagtt
gagcaagtagagcatattgctgaaaacgcagttgtgcttgatattcgtagcccagaagaa
gaagatgaaaatccgctggaaatcgatggcgttgatgtaaaacacatcccattttataag
ctagcgactcagtttggtgatttagatatgagtaaagaatatcttctttattgtgatcac
ggcgtgatgagtaaactgcaagcgctatacttacacgataacggctttaataacgttaag
gtttaccgtccgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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