KEGG   Legionella sainthelensi: CAB17_07900
Entry
CAB17_07900       CDS       T05293                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
lsh  Legionella sainthelensi
Brite
KEGG Orthology (KO) [BR:lsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lsh03016]
    CAB17_07900
Enzymes [BR:lsh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     CAB17_07900
Transfer RNA biogenesis [BR:lsh03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    CAB17_07900
 Prokaryotic type
   tRNA splicing ligases
    CAB17_07900
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: AUH71995
UniProt: A0A2H5FKD7
Position
complement(262100..263530)
AA seq 476 aa
MDLNLLEKISDFEWQIPKHGKMRVPGFIFASEGLVHDMDMKVYEQVSRVATLPGIVGGSY
AMPDAHWGYGFPIGGVAAFDPEHEGVVSAGGVGFDISCGVRLLNTGLKREEFEPYKEQMA
DALFTHIPAGVGSKSRINLTMKQMDDMLRGGAFWAVKQGYGDKEDLERIEDYGRVDGALP
EHVSEHAKKRQKNEMGTLGSGNHYLEIQEVKKIYCDKTAAAFGLALGDVVVSIHCGSRGL
GHQIGTDFLRSMLIDAQQRGIQLIDRELACAPIRSSMGERYLGAMRAGINCALANREIIT
HFMREVFQDEIPGTKIRLIYDVSHNTCKEETHQIGGKSKRLFVHRKGATRAFGPGHPQLT
ASFRHVGQPVIIGGSMGTASYVLAGTANAENKSFGSACHGAGRAMSRHQATKQWQGQDII
KQLAQQGILIRSSSYRGVAEEAPGAYKNVDLVVDAAQDSGLTKKVARLMPIVCVKG
NT seq 1431 nt   +upstreamnt  +downstreamnt
atggacttaaatttattggaaaaaatcagcgattttgaatggcagatcccgaagcacggt
aaaatgcgggtacccggatttatttttgcttcggaaggcttagtgcacgatatggatatg
aaggtttatgaacaagtgtctcgtgtggccacattacctggaattgttggtggctcatat
gctatgcccgatgctcattggggatatggatttcctattggtggcgttgcggcatttgat
cctgagcatgaaggagtagtatccgcgggaggagttggttttgatatttcgtgtggtgta
agactcttaaacactgggcttaaacgggaagaatttgaaccttacaaagaacaaatggct
gatgctttatttacccatattccagccggtgtaggcagcaaaagccgtattaatctgaca
atgaaacaaatggatgatatgttacgtggcggtgctttttgggcggtcaagcaaggatac
ggagataaggaagatttagagcgtattgaagattatggtcgcgttgatggggcattacca
gagcatgtttcagaacatgcaaaaaagcgtcaaaaaaatgaaatgggtactttaggctct
ggtaaccattacttagagattcaggaagtaaaaaaaatatattgtgacaaaactgctgca
gcatttggtttagctttgggtgatgtggtagtgagtattcattgcggttcgcgcggctta
ggccatcaaataggaactgattttctacgttccatgttaattgatgcgcaacaacgcggg
attcaactcattgatcgtgaactagcttgtgcacctattcgttcgtctatgggggaacgt
tatttaggggcaatgcgcgccggaattaattgtgccttagcaaaccgtgaaatcattacc
cattttatgcgagaagtttttcaagatgaaatacctggcaccaaaataagacttatttat
gatgtttctcataatacctgtaaggaagaaacgcatcaaataggaggcaaatcaaaacgt
ttgtttgtgcatcgtaaaggcgctacacgggctttcggaccaggtcatcctcaattaact
gcttcttttagacatgtaggccaacccgtcattattgggggcagcatgggaactgcttct
tatgttttagcaggaacagcaaatgccgaaaataagtcttttggttcagcctgtcatggt
gctggacgtgctatgagtcgacatcaggcaacaaaacaatggcaagggcaagatatcatc
aagcaattagcccaacaaggtattttgattcgcagcagttcctatcgtggggtagcagaa
gaagctcctggagcttataaaaatgtggatcttgttgttgatgcagcccaagactccggt
ttaactaagaaagtagccagattaatgcctattgtttgcgtgaaaggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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