KEGG   Ligilactobacillus salivarius CECT 5713: HN6_01118
Entry
HN6_01118         CDS       T01962                                 
Symbol
trmA
Name
(GenBank) tRNA (Uracil-5-)-methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
lsi  Ligilactobacillus salivarius CECT 5713
Brite
KEGG Orthology (KO) [BR:lsi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lsi03009]
    HN6_01118 (trmA)
Enzymes [BR:lsi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     HN6_01118 (trmA)
Ribosome biogenesis [BR:lsi03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HN6_01118 (trmA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 TRAM Met_10 Methyltransf_15 Methyltransf_25 PrmA MTS Cons_hypoth95 Methyltransf_11 RrnaAD TRM N6_Mtase OST-HTH N6_N4_Mtase Methyltransf_23 Methyltransf_32
Other DBs
NCBI-ProteinID: ADJ79380
Position
complement(1393214..1394584)
AA seq 456 aa
MKKKLPVSKNEDLILTIEDLTYQGMGVAKVDGYPLFIEGTLPQEKIKAHVVKVTKNYGFA
KVIDFIEKSPDRVENEDKIYLQTGIAPLQNLSYSAQLKFKRKLVTDLLQKVHLDNLEVAD
TLGMDTPYYYRNKAQVPVREVNGKLEIGFFKRNSHDFVAMEHFLIQDKRIDEILLKVRDI
LRMSKITAYNEKKHTGMIRHILVRRGYYSHEAMVVLVSRVRKIPNLDQIAFLIQQQCLDV
KSVMLNVNPDKTNVILGKKTIKLAGKDTIQDTLNGLKFDISAQSFYQVNPQQTEKLYQLA
IENAELTGKETVIDAYCGIGTISLNMAKFAKKVYGVEIVPEAIEDAKHNASLNDLDNLDF
EVGEAEVWMEKWQKQGIKPDVIMVDPPRKGLTSSLIQSAVAMEPKKVVYVSCNPATLVRD
IQEFMELGYQVTKPIQPVDQFPQTTHVESVTVLEHV
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgaagaaaaaattaccagttagtaaaaatgaagatttaattttaacaattgaagactta
acttatcaaggaatgggtgtggctaaggtagatggttatcctttgtttatagaaggtaca
ttacctcaagaaaaaattaaggcacatgtggttaaagttactaagaattatggctttgct
aaagtgatagattttattgaaaagagtccggatagagtagaaaatgaagataaaatatat
cttcaaacagggattgctccactacaaaatttaagttattcagctcaattgaaatttaaa
cgtaagttagtaactgatttgctacaaaaagtgcatttggataatttagaagtggcagat
acgttaggaatggatacaccttactactatagaaataaggctcaagttccagtaagagaa
gttaatggtaagttagagataggatttttcaagcgcaatagtcatgactttgtggcgatg
gaacatttcctcattcaagataaaagaatagacgaaattttgctaaaagtaagagacatt
ttacgcatgagcaagattactgcttataacgaaaaaaagcatactggaatgatacgtcac
attttagtgagaagaggatattattctcatgaagcgatggtagttctagttagtcgagta
agaaaaattccaaatcttgatcaaattgcattcttaattcaacaacaatgtctagatgta
aagagcgtaatgttgaatgtaaatccagataaaacaaatgttattttaggaaagaaaact
ataaaattagctggtaaagatacaattcaagatactttgaatggcttgaaatttgatatt
tcagcacaatctttctaccaagttaatccacagcaaactgaaaaattgtatcaattagca
attgaaaatgcagaattaacaggaaaagaaacggttattgatgcatattgtggaattgga
acgatctcattaaatatggctaaatttgctaaaaaggtatacggtgtagaaattgtccct
gaagccattgaagatgctaagcataatgctagtctaaatgatctagataacttggacttt
gaagttggagaagctgaagtgtggatggaaaaatggcaaaagcaaggaattaagccagat
gtaataatggttgatccaccaagaaaaggtctaacttctagtttgattcaaagcgcagtg
gcgatggaacctaaaaaagtcgtttatgtaagttgtaacccagcaactctagtacgtgat
attcaagaattcatggaactaggataccaagttacaaagcctattcaaccagtagaccag
ttcccgcaaacaacgcatgttgagagtgttactgtgttggagcatgtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

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