KEGG   Ligilactobacillus salivarius CECT 5713: HN6_01153
Entry
HN6_01153         CDS       T01962                                 
Symbol
sbcC
Name
(GenBank) Exonuclease
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
lsi  Ligilactobacillus salivarius CECT 5713
Brite
KEGG Orthology (KO) [BR:lsi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsi03400]
    HN6_01153 (sbcC)
DNA repair and recombination proteins [BR:lsi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HN6_01153 (sbcC)
    Archaeal homologous recombinant proteins
     HN6_01153 (sbcC)
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 SMC_N ABC_tran
Other DBs
NCBI-ProteinID: ADJ79406
Position
complement(1436528..1439629)
AA seq 1033 aa
MKPLKLRMKYFGPYIDETMNFTEFDNTPLFLISGKTGSGKTTIFDAMSFALFDHTSGDER
DAKQMRSDFATPNDATEVTFVFEHNGIKYTVIRSPKMNLAKKRGNGTRDVEASVKVKYIN
KEQENIEITKKNQADKFLRDLIGLDAQQFTQIVLLPQGKFRNFLNANSADREKILRKLFG
TSLYQKWTEKIQEQAKINESENEKLTTQIQIIRQQVEIEDNDEINDEEWIVKVNNQIEEK
KKKQEKVNNDITISQKQLDNLVETYQNEKVLADSIKQKEDNIHKLQSLENNQDKIELKKI
YAYKLAWYQKNQQIFNNKTDLELQIKEKSDKLVLLNQESKFLIQKHESAKIEAQELEKQQ
ENIENLKNKISTLEVKLPIYQDVKVNQEKLDNLDKNYQDTKNRLDNSVKELEKQKVSYND
LEKELAKLENLDEKQVELVNENNKLTRLSEKIDLVDHLDSEIESKKLQKEKLEKKYQEQE
ELVQESTDTEEKLNTLWIKNQIYFLAKQLAPGEPCPVCGSKEHPLPAKIDELEQVTEEDV
KLANKKAEIERSKAKEFKLRLTSITDEITELEQNKKESIDKILLDFELGEKHSLLELQEI
FQIKNDEYQKKAKDLENKVSLKEKLKGDSQLIKNEIANLEKEKDKLKEQYDDVYYRLKMT
ETTLQEQRKQLSPEFEDVKQVEEYITDTKKRVEDYQINKDKITKELQDTKAELIKVQADI
DSNDQELESKKKGLSKINKEITTLIENSEINLEEIVSLAKNLARLDSINNEINSYEKQIL
VVKTKISELDKTINNREMPNLVESNNVIADKRKELATFQAEFSDITTEINHIQKIKQEVE
QLLQEQKGNYKLMAEWKQLSDVMTGKSATKLSLERYVLQMYLQRVLNVANGRLKELTQGR
YSFQIKDEKGSYSSNTGLEINIYDDNAGKVRPVQTLSGGESFIAALALALALGEVIQANA
GGIFVDALFVDEGFGSLDSDALQIALEALQTIEGKNRMIGIISHVKELQEQIPFQVKISS
NYGKSKISYRKDF
NT seq 3102 nt   +upstreamnt  +downstreamnt
atgaaaccattaaagttaagaatgaagtactttggaccatatattgatgaaaccatgaat
tttacagagtttgataatacacctttatttttaatcagtggaaaaacgggtagtgggaaa
acaaccatttttgatgctatgagttttgctttattcgatcatacttctggcgatgaaaga
gacgctaagcagatgagatctgattttgctacacctaatgatgcaactgaagtgacattt
gtatttgagcataatggaataaagtacacagttattcgtagcccaaaaatgaatttagct
aaaaagagaggaaatggaactagagatgttgaggcttctgtaaaagtaaaatatatcaat
aaagaacaagaaaatatcgagattactaaaaaaaatcaggcagataaatttttacgtgac
ttaatcggcttggatgcacagcagtttacacaaattgttttattaccacaaggaaaattc
agaaatttcttgaatgctaatagtgctgatagagaaaagatattaagaaaattatttgga
acgagtctatatcaaaaatggacagagaaaatccaagaacaagcaaaaatcaatgaaagt
gaaaatgaaaagttaacaacacaaatacaaataatccgacaacaagtagaaattgaagat
aatgatgaaattaatgacgaagaatggatagttaaagttaataaccaaattgaagaaaaa
aagaaaaaacaagaaaaagtaaataacgatataactattagtcaaaagcaacttgataac
ttggttgagacttatcaaaatgaaaaagtattagcagatagtattaagcaaaaagaggac
aatatacataaactacaatctctagaaaataatcaagataagattgaattaaagaaaatt
tacgcttataaattggcttggtatcaaaaaaatcaacaaatatttaacaataaaactgat
ttagaattacagataaaagaaaaaagtgacaaattggtattactaaatcaagaaagtaaa
tttttaattcaaaaacatgaatctgcaaaaatagaagcccaagagctagaaaagcaacaa
gaaaatattgagaatctaaaaaataagatttcaacattagaagtaaaattaccaatttat
caagatgtaaaagtaaatcaagaaaaattggataatttggataagaattatcaagatact
aaaaataggcttgataattcagtaaaagaactagaaaaacaaaaagtaagctataatgat
ttagaaaaagaactagctaagttagaaaatttagatgagaaacaagttgagttggttaat
gagaataataaattaactagactgagcgaaaaaatagatttagtagatcatttagatagt
gagattgaatcaaagaaattacaaaaagaaaaattagaaaagaagtatcaagaacaggaa
gaattagtacaagaaagtacagatactgaagaaaagttaaatactttgtggataaaaaat
caaatttactttcttgctaaacaattagcaccaggagaaccttgtccagtatgcggatcc
aaagaacatccattaccagctaaaatagatgaattggaacaagtaactgaggaagatgta
aaattagcgaataagaaagctgaaattgaaagatctaaagcaaaagaatttaagttaaga
ctaacatctataacagacgaaataacagaattagaacaaaataaaaaagaaagcatagat
aaaatattacttgattttgaactaggggaaaaacattctttattagaactacaagaaata
tttcagattaaaaatgatgagtatcagaaaaaagcaaaagatcttgaaaataaagtcagc
ttgaaagaaaagttaaaaggtgacagtcaattaataaaaaatgaaatagctaatttagag
aaagaaaaagataaattaaaagaacaatatgatgatgtatattatcgcttaaaaatgacc
gaaactactctacaagaacaaagaaagcagttgagtcctgaatttgaagatgtaaaacaa
gttgaagaatatattacagatactaaaaagagagtggaagattatcaaataaataaggat
aaaatcactaaagaacttcaagatactaaagcagaattaattaaagttcaagctgatatt
gatagcaatgaccaagaattagaaagtaagaaaaaagggttaagtaaaattaataaagaa
ataactacattaatagaaaatagtgagattaatttagaagaaatagtttccttagccaag
aatctagcacgattagattctattaataatgaaattaatagttatgaaaaacaaatatta
gtagtaaaaacaaaaatatcggaattggacaaaacaattaataatagggaaatgccaaat
ttagttgaaagtaataatgtaattgctgataaaagaaaagaacttgcaacattccaagca
gaatttagtgatattacaactgaaattaaccatatacaaaaaataaagcaagaagtagaa
caattgttgcaagaacaaaaaggaaattataagttaatggcagaatggaaacaattatca
gatgtaatgactggtaaaagtgctactaagttgagtttggaaagatatgtgctacaaatg
taccttcaaagagtgttaaatgttgctaatggacgtttgaaagaattaactcaaggaaga
tatagtttccaaataaaagatgaaaaaggtagttatagtagtaatacaggattagagatt
aatatatacgatgataacgctgggaaagttagaccagttcaaactttatcaggtggtgaa
agttttattgctgctttagctctagcactagctttaggtgaggttatccaagctaatgct
ggtggaatatttgtggatgctttatttgtagacgaaggatttggttccttggatagcgat
gcattacagatagcattggaagccttgcagacgattgaaggaaaaaatagaatgataggg
attatcagtcatgttaaagaattgcaagaacaaataccattccaagtaaaaatatctagc
aattatggaaaaagtaagataagttatagaaaggatttctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system