KEGG   Ligilactobacillus salivarius CECT 5713: HN6_01312
Entry
HN6_01312         CDS       T01962                                 
Name
(GenBank) DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lsi  Ligilactobacillus salivarius CECT 5713
Pathway
lsi03420  Nucleotide excision repair
lsi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lsi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HN6_01312
   03430 Mismatch repair
    HN6_01312
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsi03400]
    HN6_01312
Enzymes [BR:lsi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HN6_01312
DNA repair and recombination proteins [BR:lsi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HN6_01312
   MMR (mismatch excision repair)
    Other MMR factors
     HN6_01312
SSDB
Motif
Pfam: UvrD-helicase AAA_19 Viral_helicase1 AAA_30 AAA_11 T2SSE UvrD_C_2 PhoH SLFN-g3_helicase DEAD
Other DBs
NCBI-ProteinID: ADJ79565
Position
complement(1646740..1648431)
AA seq 563 aa
MDTKIEPEVQRAIECIRSKTNFIMEGGAGSGKTRSLSEVIGEIGQRYPDRRILCITYTNN
AVNEIINRVNVKNIVVSTIHKFLWNLIKQFQDEIKWALNELIKEELINKNIPENFDARKL
EKITYDDYVSWNRGVISHNEVLSIAKKLFDTKPKLSKIVEGIYSYIFIDEYQDTDKNVVE
MFLKNLNNEKVVIGFFGDSMQAIYDRGIGDLNDYNLDRIEKKKNWRNPNAVIKVGNNLRI
DKMQQESGKTNNIEGKALFFYGKSEELLKQHPRYQELKLSDDDFKRLQLTKKSIASAVGF
PNLYELYNIDMVINLIKDVKEKNENVEDKTLKEVVKIYCKKRDSWKFKKESYKRFEHKNF
KELINQKINRDSLLSFDGNLSNSNPNRDEILKYLDRIYEIITLYEDGKIGEFLTKSKMKI
GSISDKNKISESMRKLLDGVNDDNICIGSVVELAKEELEIKTGDNFDKFIKEEGQYLWER
IKEIPFKEYKKSIEYLEKKTPYATQHSVKGSEYDNVFVMLESSWQKYSFDGMMLEDGEEP
SKRALKLFYVCCTRAQKNWLYNI
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggatacgaaaatagagccagaagttcaaagagctattgaatgtataaggagtaaaaca
aattttatcatggaaggtggagctggaagtgggaaaacaaggtcattaagtgaagttata
ggagaaattggtcagagatatccagatcgcagaattttatgtataacttatacgaataat
gcagtcaatgagattataaacagggtaaatgtaaaaaatatagttgttagtacaatccat
aaatttctctggaatttaattaagcaatttcaagatgagataaaatgggcattaaatgaa
cttatcaaagaagaattaattaataagaatattcctgaaaattttgatgcaagaaaatta
gaaaaaataacttatgatgattatgtaagttggaatcggggagtaatttcacataatgaa
gtattaagcattgcaaaaaaattatttgatacaaaacctaaattaagtaaaattgtagaa
ggtatatacagttatatttttatagatgagtatcaagatacagataaaaatgttgttgaa
atgtttctaaaaaatttaaataatgaaaaagtagtaataggtttttttggagattctatg
caagcgatttatgacagaggtataggtgatttaaatgattataatctagatagaatagaa
aagaaaaagaattggcgtaatccaaatgctgtaataaaagtcggaaataatcttaggata
gataagatgcaacaagaatctggaaaaacaaataacatagaaggaaaagcattatttttt
tatggtaagtcagaagagttgttaaagcagcatccacgttatcaggagttaaaattaagt
gatgacgattttaaaagattacaattaactaaaaagagtatagctagtgcagtaggattt
ccaaatttatatgagttatataatatcgatatggttatcaacttaataaaagatgttaag
gaaaaaaatgaaaatgtagaggataaaactcttaaggaagttgttaaaatttattgtaaa
aaaagagatagttggaaatttaaaaaggaatcatataaaagatttgagcataagaatttt
aaagagttaattaatcaaaaaattaatagagattcattattatcttttgatgggaatctt
tctaattccaaccctaatagagatgaaattctaaaatatttagatagaatatatgaaatt
attactctatatgaagatggcaaaataggcgaattcttaacgaaaagtaaaatgaaaatt
ggtagcatttcggataaaaacaaaataagtgagagtatgagaaaattattggatggagtt
aacgatgataacatctgtataggaagtgttgttgaacttgcaaaagaggaactggagata
aagacaggagataattttgataagtttataaaagaggaaggacagtatttatgggaaaga
ataaaagaaataccatttaaagaatataaaaaatcaattgaatatttggaaaagaaaacc
ccatatgcaacgcaacatagtgtgaaaggtagtgaatatgataatgtgtttgtgatgttg
gagtctagttggcaaaagtatagctttgatggaatgatgttagaagatggggaagagcca
tcgaaaagagcattaaaacttttctatgtgtgttgtaccagagctcaaaaaaattggttg
tataatatttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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