KEGG T00337: LSL

Ligilactobacillus salivarius UCC118: LSL_1341

Entry

LSL_1341          CDS       T00337

Symbol

trmA

Name

(GenBank) tRNA (Uracil-5-) -methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

lsl Ligilactobacillus salivarius UCC118

Brite

KEGG Orthology (KO) [BR:lsl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lsl03009]
    LSL_1341 (trmA)
Enzymes [BR:lsl01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     LSL_1341 (trmA)
Ribosome biogenesis [BR:lsl03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LSL_1341 (trmA)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 TRAM Met_10 Methyltransf_15 Methyltransf_25 PrmA MTS Cons_hypoth95 Methyltransf_11 RrnaAD TRM N6_Mtase OST-HTH N6_N4_Mtase Methyltransf_23 Methyltransf_32

Other DBs

NCBI-ProteinID:

ABE00146

UniProt:

Q1WSI3

Position

complement(1392529..1393908)

AA seq 459 aa
MKKKLPVSKNEDLILTIEDLTYQGMGVAKVEGYPLFIEGALPQEKIKAHVVKVTKNYGFA
KVMEFIEKSPDRVENEDKIYLQTGIAPLQNLSYPAQLKFKRKLVTDLLQKVHLDNLEVAD
TLGMETPYYYRNKAQVPVREVNGKLEIGFFKRNSHDFVAMEHFLIQDKRIDEILIKVRDI
LRMSKITAYNEEKHTGMIRHILVRRGYYSHEAMVVLVSRVRKIPNLDQIAFLIQQQCPDV
KSVMLNVNPDKTNVILGKKTIKLAGKDTIQDTLNGLKFDISAQSFYQVNPQQTEKLYQLA
IENAELTGKETVIDAYCGIGTISLNMAKFAKKVYGVEIVPEAIEDAKHNASLNDLDNLDF
EVGEAEVWMEKWQKQGIKPDVIMVDPPRKGLTSSLIQSAVAMEPKKVVYVSCNPATLVRD
IQEFMELGYQVTKSIQPVDQFPQTTHVESVTVLERTQFD

NT seq 1380 nt +upstreamnt +downstreamnt
atgaagaaaaaattacctgttagtaaaaatgaagatttaattttaacaattgaagattta
acttatcaaggaatgggtgtagctaaagtagaaggatatcctttatttatcgaaggtgca
ttgcctcaagaaaaaattaaagcacatgtggtaaaagttactaagaattacggttttgct
aaagtaatggagtttatcgaaaaaagtcctgatagagtagaaaatgaagataagatatat
ctgcaaacagggattgctccactacaaaatttaagttatccagcccaattgaaatttaag
cgtaagttagtaactgatctgttacaaaaagtgcatttagataatttagaagtggctgac
actttaggaatggagacaccttactattatagaaataaggcacaagttccagtaagagag
gttaatggtaagttagagataggatttttcaagcgtaatagtcatgattttgtagcgatg
gaacattttcttattcaagataagagaatagatgaaatcttgataaaagtaagagatatc
ttacgtatgagcaagattacagcttataacgaagaaaagcatactggaatgatacgtcat
attttagtaagaagaggatattattctcatgaggcgatggtagttttagttagtcgagta
agaaaaattccaaatcttgatcaaattgcattcttaattcaacaacaatgtccagatgta
aagagcgtgatgttgaatgtaaatccagataagacaaatgttattttaggaaagaaaact
ataaaattagctggtaaagatacaattcaagatactttgaatggtttgaaatttgatatt
tcagcacaatctttctaccaagttaacccacaacaaactgaaaaattgtatcaattagca
attgaaaatgcagaattaacagggaaagaaacggttattgacgcatattgtggaattgga
acaatctcattaaatatggctaaatttgctaaaaaggtatacggtgtagaaattgtccct
gaagctattgaagatgctaagcataatgctagtctaaatgatttagataacttggacttt
gaagttggagaagctgaagtatggatggaaaaatggcaaaagcaaggaattaagccagat
gtaataatggttgatcctccaagaaagggactaacttctagtttgatacaaagtgcagtg
gcgatggaacctaaaaaggtcgtttatgtaagttgtaacccagcaactttagtacgtgat
attcaagaattcatggaactaggataccaagttacaaagtctattcaaccagtagatcag
ttcccacaaacaacacatgttgagagtgttactgttctcgaacgtacacaattcgattga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (26)   

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