KEGG   Lysobacter soli: GOY17_11115
Entry
GOY17_11115       CDS       T06337                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
lsol  Lysobacter soli
Brite
KEGG Orthology (KO) [BR:lsol00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lsol03016]
    GOY17_11115 (thpR)
Enzymes [BR:lsol01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     GOY17_11115 (thpR)
Transfer RNA biogenesis [BR:lsol03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    GOY17_11115 (thpR)
SSDB
Motif
Pfam: 2_5_RNA_ligase2 LigT_PEase
Other DBs
NCBI-ProteinID: QGW65414
UniProt: A0A6I6GGE9
Position
complement(2457977..2458552)
AA seq 191 aa
MAQLGLGFDDAPTGEPHRLFFALWPDDALRPRIAAAAASVISEHAPGGRPLKPDRYHVTL
QFLGDFRPLPTSLVEDAKAAAAAVRSPAFELSLDEVGSFRGANVWWLGSHHAPDGLRALF
DGLGRSLAQHRVPVKSSASFVPHLTVQRDVRRFIAPTPVPPLPWPVREFVLIDSQPGRGT
PYEVIGRWPLG
NT seq 576 nt   +upstreamnt  +downstreamnt
atggcacagctgggactgggattcgacgatgcaccgacaggcgagccgcaccgcctgttc
ttcgcgctatggcccgacgacgcgctgcgtccgcgcatcgccgcggccgcggcgtccgtc
atatcggaacatgcgccgggcgggcgtccgctgaaacccgaccgctaccacgtgacgctg
cagttcctcggcgatttccgcccgctgccgacatcgttggttgaagacgcgaaagccgcg
gccgccgccgtgcgttcgccggcgttcgagctgtcgctcgatgaagtcggcagcttccgc
ggcgcgaacgtctggtggctcggttcgcaccatgcgcccgatgggctgcgcgcgctgttc
gatgggctcggtcggtcgctggcacagcatcgcgtcccggtgaaatcgtccgcgagcttc
gtgccgcacctcaccgtgcaacgcgacgtgcgacgcttcatcgcgcccacgccggtgccg
ccgctgccctggcccgtgcgcgagttcgtgctgatcgacagccagcccggacgcggcacg
ccgtacgaggtgatcgggcgatggccgctgggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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