KEGG   Lysinibacillus sphaericus: Bsph_0869
Entry
Bsph_0869         CDS       T00656                                 
Name
(GenBank) superfamily I DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lsp  Lysinibacillus sphaericus
Pathway
lsp03420  Nucleotide excision repair
lsp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Bsph_0869
   03430 Mismatch repair
    Bsph_0869
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsp03400]
    Bsph_0869
Enzymes [BR:lsp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Bsph_0869
DNA repair and recombination proteins [BR:lsp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Bsph_0869
   MMR (mismatch excision repair)
    Other MMR factors
     Bsph_0869
SSDB
Motif
Pfam: UvrD_C_2 UvrD_C UvrD-helicase Viral_helicase1 AAA_19 DEAD AAA_30 SLFN-g3_helicase T2SSE NACHT ResIII nSTAND3 AAA_11
Other DBs
NCBI-ProteinID: ACA38485
UniProt: B1HZ85
Position
complement(912175..914403)
AA seq 742 aa
MTVKHPDFQTEVERLAYTQSYMQQILNESQRDLKSAQENIRKSMADLDYLDSSLSYLNIL
TNARFFEMARNQKEGLEAVQKKPYFARIHFQKTGDPEELLYIGKTSLFHRETHEPIIVDW
RSPVANVYYDGRLGDMEYDVRGEIHKGHLFAKRQYKIENGDLLDIRDIDLTTNDELLQEA
LAGKADVRLTEIVSTIQKEQNEIIRAHLRQPIIVQGAAGSGKTTIALHRISYFLYTMGEH
FNPEQLMILAPNKLFIDYIGDVLPELGVDKICQTTFTDYVLSATKLKLKLQNPNEQLESL
VAGGNSQPTAWIAEMKGSLYYRDVIERYIQKLEQDIAEQFEDVYIERYCIMRASHLKKLF
LYEFSYMPIEKRLAHIKKVLASHVRQKKQSVLATLHKKYDEALGKALNGIRDDEKRRRVV
TKFIDERDERIPAIEKEAKSTAAAYMRRFSKHNIKTLYRSLLTNAELLAELAPEWHYLEQ
QQFLQSHRKEQWALEDLAALYYLQARLKGIPDEWKMRVVFIDEVQDYSLFQLAALKTGLD
TDMFTMVGDLAQGIHSYRSLTAWEPVQGLFPRASFRTLQKSYRTTIEIMEVANEILAQMD
EQLPLVEPVVRHGNVPSFIQAEQFDALKIKEIFDTIRQHGHRSIALICKTTVEAIMMQND
LTAHQLPAQLLTENDSINQEMLLVVPSHLAKGLEFDAVIVAAFHTPFYDTPIDRKLLYVA
LTRAMHELYLIGPSKNTFLLEN
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgactgtaaaacatccagattttcagacagaagtagagcgattagcgtatacccaaagt
tatatgcaacaaattttaaatgagtcacaaagagatttaaaatccgctcaagaaaatatt
cggaagtcgatggcagatcttgattacttagattctagtttgagttatttaaacatctta
accaatgcccgattctttgaaatggcccgtaatcaaaaggaagggctagaagccgttcaa
aagaagccttattttgccagaatccattttcaaaagacaggtgaccctgaagaacttctt
tacattggaaaaacctcgttatttcatcgtgaaacacatgagccgattattgtcgattgg
cgctcaccagtagcgaatgtctattatgatggccgccttggtgatatggagtacgatgtc
cgtggagaaattcataaagggcatctatttgctaagcgacaatataaaattgaaaatggc
gatttgctcgatatacgtgatattgatttaactacgaacgatgaactgttacaagaagca
ttggctggtaaagctgatgttcgtctaaccgaaattgtctcgacaatccaaaaagagcag
aatgaaattattcgcgcacatcttcgtcaaccaataattgtgcagggagcagcaggcagt
ggaaaaactaccattgccctacaccgaatatcctatttcctctacacaatgggtgagcat
tttaatcctgagcagctcatgattttagcaccgaataagttatttattgattatattgga
gatgtcttaccagaactaggcgtcgataaaatatgccaaactacttttaccgattacgtt
ctatccgccactaaactaaaattaaaacttcaaaatccaaatgaacaattagaatcgctt
gtggcaggaggaaattctcagccaactgcttggatagctgaaatgaaaggctctctttat
tatcgcgatgttatcgaacgctatatccaaaaactagagcaagatattgcagagcaattt
gaagatgtttacattgaaagatactgtatcatgcgggcttctcaccttaagaagctattt
ttatatgaattttcttatatgccaatcgaaaaacgactagcacatattaaaaaggtgtta
gctagccatgttcgtcagaaaaagcagtctgtcttagctacactccataaaaaatatgat
gaagcactaggcaaggccttaaatggaattcgagatgatgaaaaacggcgacgtgttgta
acaaagtttatcgatgaacgagatgagcgaattcctgccattgaaaaagaagccaaatca
acggcagctgcatatatgcgtcgcttttcgaaacacaacattaaaactctctatcgttca
ctgctcaccaacgctgaacttttagcggagttggcacctgaatggcattatctcgaacaa
cagcaatttttacaatcacatcgcaaggaacaatgggcacttgaagatttagctgcactt
tattatttacaggcacgcttaaaaggcatcccagatgaatggaagatgcgcgttgtcttt
atcgatgaagtacaagactatagtctttttcagctcgctgctttaaaaacaggtttggat
actgatatgtttacaatggttggtgatttagctcaaggaattcatagctatcgctcatta
actgcttgggagcctgtccaaggtttattcccacgagcaagctttcgaactttgcaaaaa
agctatcgtacaaccattgaaattatggaagtcgctaatgaaattttagcgcaaatggat
gaacaacttccgttggtggagccagttgttcgtcatggcaatgtgcctagttttattcaa
gcggaacagttcgacgccttaaaaattaaagaaatttttgacacgattcgtcaacatgga
catcggtccattgctttaatatgcaaaacgactgttgaagcaataatgatgcaaaacgat
ttaacagctcaccaattacctgcacagctcctaactgaaaatgattccattaatcaggaa
atgttactcgttgttccaagccatttagcgaaaggacttgaatttgatgccgttattgta
gctgcgtttcatacgcccttttacgacacgcccattgaccgaaagctactctatgtagca
ctcacacgggccatgcatgagctttacctaataggtccctccaaaaatacattcttatta
gaaaattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (31)   

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