KEGG   Lonchura striata domestica (Bengalese finch): 110469903
Entry
110469903         CDS       T05897                                 
Name
(RefSeq) nucleolar RNA helicase 2
  KO
K16911  ATP-dependent RNA helicase DDX21 [EC:3.6.4.13]
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lsr03009]
    110469903
   03036 Chromosome and associated proteins [BR:lsr03036]
    110469903
Ribosome biogenesis [BR:lsr03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    110469903
Chromosome and associated proteins [BR:lsr03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    110469903
SSDB
Motif
Pfam: DEAD Helicase_C GUCT ResIII CMS1 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 110469903
NCBI-ProteinID: XP_021384794
Position
6:complement(2603504..2614805)
AA seq 714 aa
MPEATRCSSSSGAESGSDCSMDTEGVPESGRRRHKKEKKEKKSKRRDKFQRGKTQTDDSE
ESAEERYAPKAKKSKSVSKQNGHTKEESLEKSRLSSFSSKSSRKSRQSSSSDTSSDSESE
SEQDQELTGEQKEGAFSNFSISKETVQLLQARGVTYLFPVQVKTFNPVYAGKDVIAQART
GTGKTFSFAIPLIEKLQGDSQERRRGRPPKVLVLCPTRELANQVAKDFKDITRKLTVACF
YGGTPYNGQIDLMRSGIDILVGTPGRIKDHLQNGKLDLTKVKHVVLDEVDQMLDMGFAEQ
VEDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSRYEQIDLIGKRTQKAATTVE
HLAIECHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKEANELALNASIKQDCQSLHGDIP
QKQREITLKGFRNGSFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAG
RTGICICFYQRKEEYQLRHVEQKAGITFKRVGVPTATDIIKASSKDAMRCLDSVPQTAIE
YFRESAQLLIKEKGPVNALAAALAHISGATSIEQRSLLNSDVGFVTMILRCSEEINNMSY
AWRRLREVLGDDVDRKVNRMCFLKGKMGVCFDVPVAEQKEIEARWEDSKHWRLCVATELP
ELVESARGGGGGGGSGGGNGRSFSSSRNGRRGGSGRNRFRSRGQKRSFSRAFEH
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgcctgaggccacccggtgcagcagcagcagcggggccgagtcgggctccgactgctcc
atggacactgagggggtcccggagagcggccgccggcggcacaagaaggagaaaaaggag
aagaaatctaaacgccgtgacaagtttcaaaggggaaagactcagacagatgacagcgag
gagtcggctgaggagcgctatgccccgaaagccaagaaatcaaagagtgtcagcaaacag
aacggtcacacgaaagaggaaagcctggagaaatcgagattgtcctccttcagcagcaaa
tcctcccgcaaaagccgacagagtagttctagtgacacgtcaagcgacagcgaaagtgag
agcgagcaggatcaggagttgactggagaacagaaggagggtgctttctccaatttttct
atttccaaagaaactgtccagcttcttcaagctcgaggagtgacatacctgttccctgtg
caagtgaagaccttcaatccagtgtatgctggcaaggatgtcattgctcaagcacgaact
ggaacagggaaaacattctcttttgctattcccttaattgaaaagcttcagggagactca
caggaaagaagaagaggccgtccaccaaaggttctagttctttgtccaacaagagagctg
gcaaatcaggttgccaaagatttcaaggatatcacaaggaagctgacagtggcttgtttt
tatggaggaactccctataacggacaaattgacctcatgagaagtggcattgacattttg
gttgggacacctggtcgaatcaaagaccacctgcagaatggcaagctggaccttaccaag
gtcaaacacgttgtacttgatgaagttgaccagatgctggacatgggatttgctgagcaa
gtggaagacattttacgagttgcatacaagaaggattctgaagacaatccccagacactg
ctgttttctgcgacttgcccacactgggtgtatgatgtggctaagaaatacatgaagtct
agatatgaacagattgaccttattgggaaaagaactcagaaggctgctacaacagtagaa
catttggcaatagagtgtcactggtctcagagagctgcagttattggagatgtcattcag
gtctacagtggcagccatgggaggaccattgtcttctgtgagaccaaaaaggaggcaaat
gaactggctttgaatgcttcaatcaaacaggattgccagtcattgcatggtgacattcct
cagaagcagagagagatcacactgaagggttttagaaatggttcatttaaagttctggtt
gcaaccaatgtagctgcccgtggtttagatatcccagaagttgacctggttgtacaaagc
tcaccaccaaaggatgtggagtcctacatccatcgctcggggcgcacaggccgagctggg
cgcactgggatctgcatctgcttctaccagcggaaggaggaataccagctgagacacgta
gagcaaaaggcgggcattacattcaagcgcgttggtgttcctactgcaacagacataata
aaggcttccagcaaagatgccatgaggtgcctggattctgttcctcagactgctattgag
tatttcagagaatctgctcagttgctaataaaagaaaagggaccagttaatgctctggct
gcagctctggcccatatttcgggtgctacttccattgaacagcgctcactgctgaactcg
gatgtgggatttgttacaatgatactacgctgctctgaagagataaacaacatgagctat
gcctggcgaagactgcgagaagtgttgggtgatgatgttgatcggaaggtgaacagaatg
tgtttcctcaagggaaaaatgggtgtgtgctttgatgttcctgtggcagagcaaaaagaa
atagaggcaaggtgggaagattcaaaacactggcgtttgtgtgtggccactgaattacca
gagctggtagaatccgcacgaggaggaggaggaggaggagggagtggtggaggaaatggc
cgaagcttctcaagctccaggaacggtcggcgtgggggctctggtagaaacagattcagg
agcagaggccagaaacgaagtttcagccgagcgtttgaacattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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