KEGG T05897: 110470649

Lonchura striata domestica (Bengalese finch): 110470649

Entry

110470649         CDS       T05897

Symbol

MKRN2

Name

(RefSeq) probable E3 ubiquitin-protein ligase makorin-2

K15687

E3 ubiquitin-protein ligase makorin [EC:2.3.2.27]

Organism

lsr Lonchura striata domestica (Bengalese finch)

Brite

KEGG Orthology (KO) [BR:lsr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsr04121]
    110470649 (MKRN2)
Enzymes [BR:lsr01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110470649 (MKRN2)
Ubiquitin system [BR:lsr04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110470649 (MKRN2)

SSDB

Motif

Pfam:

zf-CCCH_4 zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_3 zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_4 MKRN1_C APOBEC1

Other DBs

NCBI-GeneID:

110470649

NCBI-ProteinID:

XP_021386129

Position

12:complement(1891396..1900312)

AA seq 411 aa
MSTKQVTCRYFLQGVCREGSKCLFSHDLATSKSSTICKYYQKGQCAYGSRCRYDHVRLPP
AGGAAAPPPSAAPGSPRAPPEPGPGAPRSRREKRTLVLRDRNLCGPSEDAQRPGGPGAGL
CCGSPGDSQEDKPHSYLEAICSGLQEPGPGGCPGAAEQLCPYAAAGACHFGERCLYLHGE
LCEICGLQVLHPFDQEQRKAHEMMCMATFEHDMERAFAIQASQDKVCSICMEVVYEKPSA
SERRFGILSNCTHTYCLSCIRQWRCAKQFENPIIKSCPECRVISEFVIPSVYWVEEQEKK
NELIEAFKQGVGKKPCKYFEQGKGTCPFGGKCLYLHAYPDGTRAEPEKPRKQLSSEGTVR
FFNSVRLWDFIEDRESRSTPDAEVTELGELFMHLSGAEEDPTAAREHTQPL

NT seq 1236 nt +upstreamnt +downstreamnt
atgagcacgaagcaggtgacgtgcaggtacttcttgcagggcgtgtgccgggagggcagc
aagtgcctcttctcccatgacctggccaccagcaaatcctccaccatctgcaagtactac
cagaaggggcagtgtgcctacggctcccgctgcaggtatgaccacgtgaggctccctccg
gcgggcggagccgcggccccgccgccctccgcggccccgggcagcccccgggcgcccccc
gagcccggccccggcgccccgcgcagcaggagggagaagaggacgctggtgctgcgggac
agaaacctgtgcggccccagcgaggacgctcagcggcccggcggccccggggccgggctg
tgctgcggcagccccggggacagccaggaggacaagccccactcctacctggaggccatc
tgcagcgggctgcaggagccggggcctggcggctgccccggtgccgcggagcagctgtgt
ccctacgccgccgccggcgcctgccacttcggggagcgctgcctctacctgcacggggag
ctctgcgagatctgcggcctccaggtgctgcaccccttcgaccaggagcagaggaaggcc
cacgagatgatgtgcatggcaacgtttgagcacgacatggagagggcctttgccatccag
gccagccaggacaaggtgtgcagcatctgcatggaggtggtgtatgagaagccctcggcc
tcagagaggaggtttgggatcctgtccaactgcacccacacgtactgcctgtcctgcatc
cgccagtggagatgtgccaagcagtttgagaaccccatcatcaagtcctgccccgagtgc
cgggtgatctccgagtttgtcatccccagcgtgtactgggtggaagagcaggagaagaag
aatgagctgattgaagcatttaagcagggagtggggaaaaagccctgcaagtactttgag
caaggcaagggaacgtgtcccttcggagggaagtgtctgtacctgcacgcctatcccgac
gggacccgagcagagcctgagaagccccggaagcagctcagctccgagggcacagtgcgg
ttcttcaattccgtgcgcctgtgggacttcatcgaggacagggagagcaggagcacaccc
gacgccgaggtcacggagctgggggagctgttcatgcacctctctggggctgaggaggat
cccactgctgccagggagcacacacagcccctctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

Download RDF

DBGET integrated database retrieval system