KEGG   Lonchura striata domestica (Bengalese finch): 110471565
Entry
110471565         CDS       T05897                                 
Symbol
MEF2D
Name
(RefSeq) myocyte-specific enhancer factor 2D
  KO
K09262  MADS-box transcription enhancer factor 2D
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Pathway
lsr04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    110471565 (MEF2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lsr03000]
    110471565 (MEF2D)
   04131 Membrane trafficking [BR:lsr04131]
    110471565 (MEF2D)
Transcription factors [BR:lsr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box regulators of differentiation, MEF-2
    110471565 (MEF2D)
Membrane trafficking [BR:lsr04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    110471565 (MEF2D)
SSDB
Motif
Pfam: SRF-TF HJURP_C TFIIA FAM101 Suf FHIPEP EOS1 CPSF100_C Presenilin eIF-3_zeta MecA RR_TM4-6 API5 Spt20_SEP PAT1 Rxt3 TERB2
Other DBs
NCBI-GeneID: 110471565
NCBI-ProteinID: XP_021387952
Position
25:complement(2888276..2924072)
AA seq 520 aa
MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKG
SEDLDILFKRYGSTVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLS
PQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNG
SSLGKIIPAKSPPPPAHGAQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGV
SQATHSLTTPVVSRKVCKNVKKLLVWKNPELAHYQLTSAELSSLPAFSSPGGLSLGNISA
WQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPQQPQQQHLVPVSLGNLIQGSHLSHTT
TLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSS
ERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggggagaaaaaagatccagatccagcggatcacggacgagcgcaaccggcaggtgacc
ttcaccaagcgcaagtttggcttgatgaagaaagcctacgagctgagcgtcctgtgcgac
tgcgagatcgccctcatcatcttcaaccactccaacaagctgttccagtacgccagcacc
gacatggacaaggtgctgctcaagtacaccgagtacaacgagccccacgagagccggacc
aacgcagacatcatcgagacgttaagaaagaaaggttttaacggctgtgacagcccagag
cccgacggcgacgactccatagaccagagccccttgatggaggataaataccgcaaaggc
agcgaggatctggatatcctgttcaagcgatacggttccacagtgcccgctccgaacttc
gccatgcccgtgacggtgccggtgaccaaccagaacacgctgcagttcagcaacccgggc
agctcgctggtgacccagtccctggtgacctcctcgctgacagacccccggctcctgtcg
ccgcagcagccggccctgcagaggaacacggtgtccccagggctgccacagcggccagcc
agtgcaggggcgatgcttgggggagacctgaacaacacgaacggagcctgccccagcccc
gtgggcaacggctacgtcagcgcccgagcctccccgggtctccttcccgtgtccaacggc
agcagcctgggcaagatcatcccggccaagtcgccgccgccgcccgcgcacggcgcgcag
ctggccgccaacagccgcaagccggacctgcgtgtcatcacctcgcagagcggcaagggg
ctgatgcaccacctgaccgaggaccacttggctctgcaaaacacacagcggctgggtgtc
tctcaagcaactcactctctgaccacaccagttgtttccagaaaagtttgcaaaaatgta
aaaaagctgcttgtctggaagaacccagaactggcacattatcagctgacgagcgctgag
ctgtcctcgctgcccgccttcagctcgcctggagggctgtcccttggtaacatctctgcc
tggcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcagcagcaacaacagcagcagcagcagcagcagccgccgcagcagccgcagcagcag
cacctggtcccggtgtcactaggaaacttaatacaagggagtcacttgtcccacaccacc
actttgactgtcaacaccaaccccaacatcagcatcaagtccgagcctgtctcgcccaac
cgggagaggaacactgccaccccgctcagcaccttcccccaccagccccggcacgagccc
accggccgctcgcccgtcgacagcctcagcagcaacaccagctcctacgagggcagcagc
gagcgggacgatcccgcccgccccgatttcggctcctccctgggcctcctgcgacccacc
agcgagcccgagggggagagcccctccgtaaagcgcatgcgcttggatacctgggtcaca
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (27)   

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