KEGG   Lonchura striata domestica (Bengalese finch): 110471628
Entry
110471628         CDS       T05897                                 
Symbol
USP25
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
  KO
K11849  ubiquitin carboxyl-terminal hydrolase 25 [EC:3.4.19.12]
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lsr01002]
    110471628 (USP25)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsr04121]
    110471628 (USP25)
Enzymes [BR:lsr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     110471628 (USP25)
Peptidases and inhibitors [BR:lsr01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   110471628 (USP25)
Ubiquitin system [BR:lsr04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    110471628 (USP25)
SSDB
Motif
Pfam: UCH UIM UBA_4
Other DBs
NCBI-GeneID: 110471628
NCBI-ProteinID: XP_021388054
Position
1:106289921..106379612
AA seq 1117 aa
MTVEQNVLQPGGAAKHQQTFLNQLREITGINDIQVLQKALKDSNGNLELAVAFLTAKNAK
VPQLEEATYYQTALPGNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRET
GITDEEQAISRVLEASIAENKASLKRTHPEVWSDSPNPYDRKRQDNCPVGLKNVGNTCWF
SAVIQSLFNLLEFRRLVLNFNPPANAQDLPRNQKEHRNLPFMRELRYLFALLVGSKRKYV
DPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQIKAEEERDGEKPKNPMVELFY
GRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSAKSGQE
HWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPPILYLDRYMHKNREITRIKRDEIK
RLKEYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPVDDLGASAPASG
TLPPQIPPSTIEQQGPSSSDVPSTSPVQRSVIHKPFTQSRIPPDLPMHPAPRHITEEELS
VLEGCLHRWRTEVENDTRDLQESISRIHRTIELMYSDKTMVQVPYRLHAVLVHEGQANAG
HYWAYIYDHHQNRWMKYNDISVTKSTWEELERDSFGGYRNASAYCLMYINDKEQYLIQEE
FNKETGQMLVGMDTLPSDLRDYVKEDNKRFEKELEEWDAELAQKAQQEKLLSQIPRAPAP
SPAPVQAGEPEYLEQPSRTDISKHLKEDSVQAINKALAEQEDRGPEAIMDTSSDNAPAQA
APTQRVVEVAIPDVGTFVIESEEGGYDDEVMLTPNMQGIIMAIGKARNVYDRCGPEAGFF
KAIKLEYTRLLKLAQEDPPPECDYRLRHAIVYFIQNQAPKKIIERTLLEQFGDHNLSFDE
RCRNIMKVAQAKLEMIKPDEVNMEEYERWHQDYRHFRETTMFLMVGLEFFQKKSYMEALL
YLIYAYQNNKELLSKGPYRGHDEELISHYRRECLLKLNEHAAALFESGDDQEVNNGLIIM
NELIVPCLPLLLVDEMEEKDIVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTE
IKGFNDPPKLPSYSTHELCERYARIMLSLSRTPADGR
NT seq 3354 nt   +upstreamnt  +downstreamnt
atgacggtggagcagaacgtgctgcagcccggcggcgccgccaagcaccagcaaacattt
ttaaatcagctgagggagatcactggtatcaatgacatccaggtactacaaaaggcactg
aaggacagcaatggtaatctggagctggctgtggcttttctcactgcaaagaatgccaag
gttccccagctagaggaggcaacttactaccaaacagcccttcctgggaatgacagatac
atcagcgtgggcagccaggcagacaccaatgtgattgatctcactggagatgataaagat
gatcttcagagggcaattgccttgagtttggaggagtcaaacagggcattcagggagact
ggaataacagatgaggaacaagccattagcagagttctagaagccagtattgcagaaaat
aaagcgagtttaaagaggacgcatccagaggtgtggagtgactctccaaacccttatgat
cgaaagcggcaagacaactgcccagtaggattaaagaatgttggcaacacgtgctggttt
agtgctgtcattcagtcattatttaacctactggagtttcgaagactagttttgaatttc
aatcctcctgcaaatgctcaagatttaccccgaaaccaaaaggaacataggaatctgcct
ttcatgcgtgaattgaggtacctgtttgcacttctggttggttcaaagagaaaatatgtt
gatccatcaagagcagttgaaatccttaaagatgcttttaaatcaaatgattcccagcag
caagatgttagtgaatttacacacaaattattagattggctggaagatgccttccaaatt
aaagctgaagaagagagggatggagaaaaaccaaagaacccaatggtggagttgttttat
ggacgatttctagcagtaggtgtacttgaaggtaaaaaatttgaaaacacagaaatgttt
ggccagtatccactacaggttaatggctttaaagatctgcatgagtgcctagaagctgca
atgattgaaggggaaattgaatctctccattcagaaaactctgccaagtctggtcaggag
cactggttcacagagcttcctcctgtcttaacttttgagctgtcaagatttgaatttaat
caggccttggggagaccagagaagatacacaacaaattagaatttcctccaattttgtat
ctagacaggtatatgcacaaaaacagagaaataacaagaattaaacgagatgaaatcaag
agactcaaagagtacctcacagttttacaacagagactagaacgatatttaagctatggt
tctggtcctaaacgattccccttggtagatgtcctgcagtatgccctggagtttgcctcc
agcaagccggtgtgcacgtcccccgtggatgacctgggtgccagtgctcctgccagcggc
acactgccaccacagatcccccccagcacaatagagcagcaggggccttcatcatcagat
gtcccaagcacatctcctgtacaaagatcagtaatacacaaaccattcacacaatcacgg
attccccctgacctgccgatgcatccagcaccacggcacatcacggaggaggagctgtct
gtcctggagggctgtttgcatcgctggaggactgaagtagagaatgacacaagagattta
caagaaagtatatcaagaatacatcggacaattgaattgatgtactctgacaaaacaatg
gtccaagttccttataggttgcatgctgtcctagttcatgagggtcaagcgaatgcaggt
cactactgggcatatatttatgaccaccaccaaaacagatggatgaaatataatgatatt
tctgtgacaaagtcaacttgggaagagttggaacgagattcttttggaggttacaggaat
gccagtgcatattgtttaatgtacatcaatgacaaggagcagtacttgatacaagaggag
tttaacaaagaaacggggcagatgcttgttggaatggacacgctgccttctgatctaagg
gattatgtcaaggaagacaataaacgttttgaaaaagaacttgaagagtgggatgcagaa
cttgctcagaaagcacagcaggagaaattgttatctcagatacccagggcaccagcaccc
tcacctgctccagttcaagcaggagaaccagagtatttagagcagccatcaagaactgat
atttcaaagcacttaaaagaagattctgtacaagcaatcaataaagctttagctgaacaa
gaagacagaggtccagaagctataatggatacgagctctgataatgccccagctcaagca
gctcctacccagcgagtggtagaggtggcgatccctgatgtagggacttttgtgattgag
tcagaggaggggggttatgacgatgaggtcatgctgaccccgaacatgcaaggtattatc
atggctataggtaaagccaggaatgtttatgacaggtgtgggccagaagcagggttcttt
aaggcaattaaattggaatacacacgtctgctaaaattagcccaggaagatccaccacct
gaatgtgattatcgtttgcgtcatgcaattgtttacttcatccaaaaccaggcaccaaag
aagataattgagaggacattactggagcagtttggagatcacaatctcagctttgatgaa
aggtgtcgtaatataatgaaggttgctcaagccaaacttgaaatgataaagccagatgaa
gtaaacatggaggaatatgagagatggcatcaagactatagacatttcagggaaacaacc
atgtttctcatggtaggattggagtttttccaaaaaaagagttacatggaagccttgctc
taccttatctatgcttaccagaataacaaagaactcttgtccaaaggcccatacagaggg
cacgacgaagagctgatatctcactacagacgagagtgtttgctaaaactaaatgaacat
gctgcagcactctttgaatcgggagacgatcaggaagtaaataatggcctgatcataatg
aacgagcttattgtcccctgtttgccattactactggtggatgaaatggaagagaaagat
attgttgctgtggaagatatgaggaaccgttggtgttcctatcttggacaagaaatggaa
cccaacttgcaagaaaaactgacagatttcctgccaaaactgctagattgttctacagag
attaaaggtttcaatgacccgccaaagttaccctcctactccacacatgaactgtgtgaa
agatacgcccgaatcatgttgtcactcagtcgaactccagccgatggaagataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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