KEGG   Lonchura striata domestica (Bengalese finch): 110472238
Entry
110472238         CDS       T05897                                 
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
  KO
K09276  Y-box-binding protein 1
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lsr03000]
    110472238 (YBX1)
   03019 Messenger RNA biogenesis [BR:lsr03019]
    110472238 (YBX1)
   03041 Spliceosome [BR:lsr03041]
    110472238 (YBX1)
Transcription factors [BR:lsr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, YB-1/DbpB-like
    110472238 (YBX1)
Messenger RNA biogenesis [BR:lsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     110472238 (YBX1)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110472238 (YBX1)
Spliceosome [BR:lsr03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    110472238 (YBX1)
SSDB
Motif
Pfam: CSD OB_RNB
Other DBs
NCBI-GeneID: 110472238
NCBI-ProteinID: XP_021389422
Position
21:complement(4090843..4100219)
AA seq 324 aa
MSSEAETQPPAAPVPPAAPAAPADSKPNGGTGNGGSGLASAAPPAGGDKKVIATKVLGTV
KWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAA
NVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGAENIPEGQAQ
QRRPYRRRRYPPYYMRRPYGRRPQYTNPPVQGEIVEGADNQGAGDGRPVRQNMYRGYRPR
FRSLTFRGPPRQRQPREDGNEEDKENQGDETQSQQPPQRRYRRNFNYRRRRPENPKPQDG
KETKTAEPPAENTSAPEAEQGGAE
NT seq 975 nt   +upstreamnt  +downstreamnt
atgagcagcgaggccgagacccagccgcccgccgcccccgtccccccggcggcccccgcc
gcccccgccgactccaagccaaacggtgggaccgggaacgggggcagcggcctggcctcg
gcggcacctcccgctggcggggacaagaaggtcatcgcaacgaaggttttgggaacagtg
aaatggttcaacgtgaggaacggttacggcttcatcaacaggaatgacaccaaggaagat
gtgtttgtccatcagactgccataaagaagaataaccccaggaagtacctccgcagcgta
ggagatggagagaccgtggagttcgatgtggttgagggagaaaagggcgcggaggcagcc
aatgtcacaggacctggtggagttccagtgcagggcagtaaatacgcagcagatcgtaac
cattacagacgatatccacgtcgcaggggtcctccacgcaactatcagcagaactaccag
aacagtgagagtggggaaaagaacgaaggagcagagaacataccagaaggtcaagcccag
caacgccgtccctatcgcaggcggcggtacccaccttactatatgcgtaggccctatggg
cgtcgtccacaatataccaaccctcccgtacagggagagatagtggagggtgctgacaac
cagggtgcaggagatggcagaccggtcaggcaaaacatgtaccggggttacagaccaaga
tttcgcagcttgactttcaggggtcctcctcgtcaaagacagcctagggaggatggaaat
gaagaagataaagagaaccaaggggatgaaacccaaagtcagcagccacctcaacgtcgg
tatcgccgtaatttcaactaccgacgcagacgcccagagaaccctaaaccacaagatggc
aaagagactaagacagccgaaccaccagctgagaacacgtccgctcccgaggctgagcag
ggcggggctgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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