KEGG   Lonchura striata domestica (Bengalese finch): 110472725
Entry
110472725         CDS       T05897                                 
Symbol
PUS7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lsr03016]
    110472725 (PUS7)
Enzymes [BR:lsr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     110472725 (PUS7)
Transfer RNA biogenesis [BR:lsr03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    110472725 (PUS7)
 Prokaryotic type
    110472725 (PUS7)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-GeneID: 110472725
NCBI-ProteinID: XP_021390357
Position
1A:13736816..13758494
AA seq 651 aa
METVEMNSVSLKRPRSEDDVANADEIKRQKILEKSKAGNDSGQSIETVTEQPEDAKSEII
PNEESEEQEEEELEDSDEDGDPESFADMMKHGLTESDVGITKFVSSHKGFSGILKERYSD
FVVHEIGKDGRVSHLDDFSVPVDDEDPPEETFTVLSDEDKQRLEELQLFKNKETSVAIEV
IEDTKEKRTIIHQAVKSLFPGLETKTEDRDGKKYIIAYHAAGKKALAKVRTATDPRKHSW
PKSRGSYCHFVLYKENKDTMDAINVLSKFLRVKPNIFSYMGTKDKRAITVQEIAVLRITA
QRLAHLNKCLMNFKLGNFSYKNHPLKLGELQGNHFTVVLRNITGTDEQIEQAMHSLREIG
FINYYGMQRFGTTAVPTYQIGRAILQNNWNEVMDLILKPRPGAEKGYLVKCREEWAKTKD
PAAALKKLPVKRCVEGQLLRGLLKYGMKNIISAFGIIPRNNRLMYIHSYQSYVWNNMVSK
RIEEYGLRAVPGDLILKGATAVHIEEGDVDNYTIHDVVMPLPGFDVIYPKHKIGEAYKEM
LVADNLDINNMRHKIRDYSLSGAYRKIIIRPQNVNWEVVAYDDPKIPLFTTDLDKLEGKP
LPVLPTDGKFRALKMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLR
NT seq 1956 nt   +upstreamnt  +downstreamnt
atggaaactgtagagatgaatagtgtatccttgaaacgtcctcgctctgaggatgatgtg
gccaatgcagatgaaattaaaagacagaagatcttggagaagtctaaggcggggaacgac
tctgggcagagtattgagactgtaacagaacaacccgaggatgcaaagagtgaaataatc
cccaatgaggaaagtgaggagcaggaagaagaggaactagaggatagtgatgaagatgga
gatccagagagctttgcagacatgatgaagcatggactgacagaaagcgatgttgggata
actaaatttgttagctctcataaagggttttctggaatcttaaaagagagatactcagac
tttgttgtccatgaaataggcaaagatggacgtgtgagccatttagatgacttttctgtt
ccagtggatgatgaggacccaccagaagaaacatttacagttttgtcagatgaagacaag
cagcgtttagaggaactccagctttttaagaataaggaaaccagtgttgccatagaggta
attgaagacaccaaagaaaaaagaaccatcatccatcaggctgtgaagtccttgtttcca
ggactggagacaaaaacagaagatagagatggaaagaaatacattattgcttatcatgct
gctggaaaaaaagcattggcaaaggtcagaactgcaacagatccaagaaagcactcttgg
ccaaaatctaggggaagctactgccattttgtactgtacaaggagaacaaggacaccatg
gatgccattaatgtcctatccaaatttttaagagtgaagccaaacatcttttcctacatg
ggaactaaggataaaagggctataacagttcaagagatcgctgttctcagaatcactgca
caaagacttgctcatttgaataaatgtttgatgaacttcaaattgggaaatttcagttac
aagaaccatccattgaaactgggagaactgcaagggaaccatttcactgttgttctcaga
aacataacaggaactgatgagcagatagagcaagcaatgcattcactcagggaaattgga
ttcattaattactatggaatgcaaagatttggaaccacagctgttcctacttatcaaatt
ggcagagctattctacagaataactggaatgaagtaatggatttgatattaaaaccacga
cctggagctgaaaagggatacttagtcaaatgcagagaagaatgggcaaagactaaagat
ccagcagcagccctcaagaaactgcctgtaaaaaggtgcgtggaaggacagcttctacgt
ggactcttaaagtatggaatgaagaacataatctctgcatttggcataataccaagaaat
aatcgattaatgtatattcatagctaccagagttatgtgtggaataatatggtgagcaag
agaatagaagaatatgggcttagagctgtaccaggagatctcattcttaaaggagccaca
gctgttcacattgaagaaggagatgttgacaactacactatccacgatgtagtgatgcca
ttgcctggatttgatgtcatttatccaaagcataaaattggtgaggcctacaaggagatg
ctggtagctgacaaccttgatatcaacaacatgaggcataaaatcagagattactcactt
tctggagcatacagaaaaattatcattcggcctcagaatgtcaattgggaagttgttgca
tatgatgatcctaaaatcccattatttactacggatttggataaactggaaggaaaacca
ttaccagtactccctacagatggcaaattcagggcactaaagatggagttctcccttccc
ccatccacttatgcgaccatggcgattcgagaagttttgaaaatggacacaagcataaaa
aaccagacacaactgaatactacctggttgcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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