KEGG   Lonchura striata domestica (Bengalese finch): 110475285
Entry
110475285         CDS       T05897                                 
Symbol
STAMBPL1
Name
(RefSeq) AMSH-like protease isoform X1
  KO
K11867  AMSH-like protease [EC:3.4.19.12]
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lsr01002]
    110475285 (STAMBPL1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsr04121]
    110475285 (STAMBPL1)
Enzymes [BR:lsr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     110475285 (STAMBPL1)
Peptidases and inhibitors [BR:lsr01002]
 Metallo peptidases
  Family M67
   110475285 (STAMBPL1)
Ubiquitin system [BR:lsr04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    110475285 (STAMBPL1)
SSDB
Motif
Pfam: USP8_dimer JAB Prok-JAB TPR_8
Other DBs
NCBI-GeneID: 110475285
NCBI-ProteinID: XP_021394992
Position
6:18652434..18673441
AA seq 481 aa
MLQLAEGLCVPALPRSPHTLPAHEPAPEMETVEEKSNLLGLQADNNMEQPFTISSLKKLV
AIPDHTDISVTPEERVRALSKLGSNITINEDITPRRYFRSGVEMERMASVYMQEGNLENA
FVFYNKFITLFVEKLPSHRDYHQCAVPEKQDIIKKLKEVAFPRTDELKRDLLKKYNLEYQ
EYMQHKNKCKTEFLKKLEHQKLIEAEKKRIAHMRQQQLESEQFQFFEDQLKKQELARDQK
IKESVVMSEQIDGSMLSCVSVPENSSLSAALLEKKERRGTSGCAGHSPPVERVLKPAATL
SAVQTQLAEALRGVILPRDLCHKFLLLAEANTVRGIETCGILCGKLTHNEFTITHVIVPK
QTAGPDYCDMENVEELFGIQDQYDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAI
AIVCSPKHNDTGIFRLTNAGMLEVSACKKKGFHPHTKDPRLFNPCTHVVGKDIKIIVLDL
R
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgctgcagctcgccgagggtttgtgtgtgcctgcactccccagatctcctcacacgctc
ccagcccatgagcctgctcctgagatggagactgtggaggaaaagagcaatctccttggt
ttacaggcagacaacaacatggagcaaccattcactatcagctcattgaaaaagctggta
gcgattcctgaccacacagacatctctgtgaccccagaggagagagttcgtgccttaagc
aagcttggcagcaatatcaccatcaatgaggacatcactccgcggcgctacttccgatcc
ggcgtggagatggagcgcatggcgtcggtgtacatgcaggaggggaacctggagaacgcc
tttgtgttttataacaagttcataacgttgtttgtagaaaagctgcccagtcaccgagac
tatcaccaatgtgcagtaccagagaaacaagatatcattaagaaattgaaggaggttgca
tttccacggacagacgaactgaaaagagatcttttaaaaaaatataacttagaatatcaa
gaatacatgcaacacaaaaacaaatgtaaaactgaatttctgaagaaactggagcaccaa
aagctcatagaggcagagaagaaacgaattgcacatatgcggcagcagcagctcgaatcg
gagcagtttcagttctttgaggatcagcttaagaagcaagaactagctcgagatcagaag
atcaaagagagtgtggttatgtctgaacagatagatggaagtatgctgtcttgtgtttct
gtaccagagaacagctccttatctgcggcactgctggagaaaaaagagaggcgcggcacc
tctggctgtgctgggcactcgccaccagtggaacgggtcttgaagccagcagctactcta
agtgctgttcaaactcaattggccgaagcactcagaggtgtcattttgcccagggatctc
tgtcacaaatttctgctgctggcagaggcaaatacagtaagaggaatagagacatgtgga
attctctgtggaaaactgactcataatgaatttactattacacatgtaatagtgccaaag
caaactgcaggaccagactactgtgacatggagaacgtggaagaattatttggtattcag
gatcagtatgatctcctcactttgggttggatccatacacatccaacacaaactgcattc
ttatccagtgttgatcttcatactcattgctcttatcagctaatgttgccagaggccatt
gcaattgtttgttcaccaaagcataatgacactggcatcttcagactgactaatgctggc
atgctagaagtttctgcttgtaaaaagaagggatttcatccacatacaaaggaccctagg
ttatttaatccatgtacccatgtggttgggaaagacataaagataatcgtgctggatctg
aggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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