KEGG   Lonchura striata domestica (Bengalese finch): 110475558
Entry
110475558         CDS       T05897                                 
Symbol
XYLT1
Name
(RefSeq) xylosyltransferase 1 isoform X1
  KO
K00771  protein xylosyltransferase [EC:2.4.2.26]
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Pathway
lsr00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lsr00534  Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lsr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
    110475558 (XYLT1)
   00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
    110475558 (XYLT1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:lsr01003]
    110475558 (XYLT1)
Enzymes [BR:lsr01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.2  Pentosyltransferases
    2.4.2.26  protein xylosyltransferase
     110475558 (XYLT1)
Glycosyltransferases [BR:lsr01003]
 O-Glycan biosynthesis
  Glycosaminoglycan
   110475558 (XYLT1)
SSDB
Motif
Pfam: Xylo_C Branch SARAF
Other DBs
NCBI-GeneID: 110475558
NCBI-ProteinID: XP_021395485
Position
14:5380080..5556011
AA seq 917 aa
MVAAPCARRLARRSRSALVAALTVLLLQTLLVWNFSSLDAGEEQRGGREKRDRGGEQRGQ
PQRRGPAAPHGKAMIEPPSPYTSLETQDGYFSHRPKEKMRTDSNNENSVPKDFETIDNSN
FAPRTQRQKHQSELVKKPLSKQKEHLRKKLEEEKMKENRLLGKNSNEVVQFSDHLGKNSS
NSNNLKEIDRFPTQHLLQKIENSSPELKYDQPPKCEVTGKEAISAMSRAKSQQCRQEIAD
VYCQHKLGKLMPEQVTRFCALEGKANNNVQWDEDSVEFMPANPVRIAFVLVVHGRASRQL
QRMFKAIYHKDHFYYIHVDKRSNYLHRQVLQFASQYPNVRVTSWRMATIWGGASLLTTYL
QTMKDLMEMSDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNARFIRKQ
GLDRLFLECDTHMWRLGDRKIPEGITVDGGSDWFLLNRKFVEYVTFSNDDLVTKMKRFYS
YTLLPAESFFHTVLENSPFCDSMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPA
DFHRFQQTARPTFFARKFEAVVNQEIIGQLDYYLYGNYPSGTPGLRSYWENVYEEPDGLG
ALSDVALTMFHSFSRLGLRRAESSLHAAGDSGCRYYPMGHPVSIHLYFLADRFQGFLIRH
HATNLAVSKLETLETWVMPKKVFKIASPPSDFGRLQFSEIGTEWDAKERLFRNFGGLLGP
TDEPVGMQKWGKGPNVTVTVIWVDPINVIAATYDILIESSAEFTHYKPPLNLPLRPGVWT
IKILHHWVQVAETKFLITPLTFSNQQPIKQEEAIKLHSGPPKNAYMEQSFQGLNPVLNIP
VSAARADQAKRNAGLVGTRLDAWVDSLVSSVWSAVDVCSVGPTACPVLQGCAQTAWSSLS
PDPKSELGPVKPDGRLR
NT seq 2754 nt   +upstreamnt  +downstreamnt
atggtggcggctccgtgcgcccggcggctggcgcggcgctcccgctcggcgctggtggcg
gcgctcaccgtgctgctcctgcagaccctcctcgtctggaatttcagctccctcgacgcc
ggcgaggagcagcgcggcggccgcgagaagcgagaccgcggcggagagcagcgggggcag
ccgcagcggcgcggacccgccgccccgcacggcaaggcgatgattgaacctcctagtccc
tacaccagcttggagactcaggatggctatttttcccaccgaccgaaagagaaaatgcga
acagacagcaataatgaaaattcagtccccaaggactttgaaactattgataacagtaac
tttgctcccaggactcagagacaaaagcaccagtctgagctggtgaaaaaaccccttagc
aaacaaaaggagcacttgagaaagaaactggaagaggaaaagatgaaggagaacaggctg
ctggggaagaactccaacgaggtggtgcagttcagcgatcacctgggaaaaaacagcagc
aacagcaacaacctgaaggagattgacaggtttcccacacaacatcttttacaaaaaatt
gagaacagctcccctgaactgaaatacgaccaaccacccaagtgtgaggtgacgggcaag
gaggcgatctcggccatgtcccgtgccaagtcccagcagtgtcgccaggagatcgcagac
gtttattgccagcacaagcttgggaagctgatgccggagcaggtgacacgtttctgtgcc
ctggagggaaaagccaacaacaatgttcagtgggatgaggactccgtagagttcatgcca
gccaacccagtcaggatcgcatttgtcttggttgttcatggcagagcttcccggcagctc
cagcgcatgtttaaggctatttaccataaagaccatttttattacattcatgttgacaag
cgatccaattacttgcaccggcaagtgctgcagtttgccagccagtacccaaatgtgaga
gtcacctcctggagaatggccactatctggggaggagcaagtcttctgaccacttacctg
cagaccatgaaggacttaatggagatgagtgactggccctgggatttcttcattaacctc
agtgctgccgactacccaatcaggacaaacgatcagctcgtggcattcctgtccagatac
cgtgacatgaacttcttgaaatcacatgggagagacaatgccagatttatcagaaagcag
gggctggatcggctcttcctggagtgcgacacgcacatgtggcgcctgggggaccgcaag
atcccagaaggaatcaccgtcgacggagggtcggactggttcctcctgaacaggaagttt
gtggaatatgtcactttttccaatgatgatctggtaacaaagatgaagaggttttactct
tacacgctgcttcctgccgagtccttctttcacaccgtgctggagaacagcccgttctgc
gactccatggtggacaacaacctgcgcatcaccaactggaacaggaagctgggctgcaag
tgtcagtacaagcacattgtggactggtgtggctgctcacccaatgacttcaaaccagct
gacttccaccggttccagcagaccgccagaccaactttcttcgcccgcaagtttgaggcc
gtggtgaaccaggagatcattggccagctggactattacctgtacgggaattacccgtcg
ggcacgccggggctgcgctcctactgggagaacgtgtacgaggagcccgacgggctgggc
gccctcagcgacgtggccctcaccatgttccactccttctcccgcctgggcctgcgccgc
gccgagagctcgctccacgccgctggggacagcggctgcagatactaccccatgggccat
ccagtttccatccacctttacttccttgctgaccgtttccaaggcttcctgatcaggcac
cacgcaaccaatctggctgtcagcaaactggaaactttggaaacgtgggtgatgcccaag
aaagtcttcaagattgcaagtccaccgagtgattttgggaggttgcagttctcagagatt
ggcaccgagtgggacgccaaggaaaggcttttccggaattttggaggactccttgggcca
acggatgagccagttgggatgcagaagtgggggaaaggccccaatgtcactgtgactgtc
atttgggtggatcccattaatgtaattgcagcaacatatgatattcttattgaatccagt
gccgagtttactcactacaaaccacctctgaatttgcccctgcgacctggtgtctggaca
ataaaaattctgcaccactgggtacaggtagctgaaaccaaattcctcattactcctctc
accttctcaaatcagcagcccatcaaacaagaggaagccatcaagctccacagcgggcct
ccaaagaacgcctacatggagcagagcttccagggcctgaacccggtgctgaacatcccg
gtcagcgccgcccgcgccgaccaggccaagcgcaacgcggggctggtgggcacccgcctg
gacgcctgggtggactctctggtcagcagcgtctggtcggccgtggacgtctgcagcgtg
ggccccacggcctgccccgtcctgcagggctgtgcccagacagcctggagctccctcagc
cccgaccccaagtccgagctgggccccgtcaaacccgacggccgcctgaggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (1)   
   KEGG COMPOUND (1)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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