KEGG   Lonchura striata domestica (Bengalese finch): 110475685
Entry
110475685         CDS       T05897                                 
Symbol
RRP1B
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B
  KO
K14849  ribosomal RNA-processing protein 1
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lsr01009]
    110475685 (RRP1B)
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lsr03009]
    110475685 (RRP1B)
Protein phosphatases and associated proteins [BR:lsr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110475685 (RRP1B)
Ribosome biogenesis [BR:lsr03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    110475685 (RRP1B)
SSDB
Motif
Pfam: Nop52
Other DBs
NCBI-GeneID: 110475685
NCBI-ProteinID: XP_021395687
Position
1:5819872..5842205
AA seq 750 aa
MAPAAVQPPEVQFAQRLAANEKRIRDRALKKLRGYIGVRSQRPGGGFSQEELLKIWKGLF
YCMWMQDKPLLQEELAANISQLIHVFENTETRHLFIQTFWQTMNREWNGIDNLRLDKYYM
LMRLILRQSFEVLKRNEWDEXXVEPLLQLLMKEVMDPDSNSPTGIKFHFIDIYLDELAKV
GAKELTADQNLKFIEPFCKIAAKSKDRRVLHAVATGVFEMIVDQSPFAIEDLMKELGANS
DEENVSEEGKEENEQMLKTKDRSLSGKSAQNSEKTEDINENADDGIGTVLQFDYKAVADK
IFEFASKKNTPSLNRKRLYKLVKKFQDLAEGIFPQDIPEDVSTDEDDDESGRRKRKKKAV
KPWQQNELEKVKEDKEELSSEKVPSVSQRKRKKRKKRVSLSIDSGTDDGNCEEGKAETSG
SNASSQEKVPENKKERKRKKLLVNEASETTDVATDTIENQSISEQNSLTDAEQSKKSQLK
KMNPKVQNVPAKPACQNGPATASAAEDASPCVTPLPPKAVKKKQKAGAVLVNGDPPVQQT
DLKPSKEGLLGTLPKKGESAPSRKVILKTKLVGLEGMKVSTQNAAALKKKRKVKEVLNSV
EANGVLETVCKKNRKVESSAALSPLKKKKAKPGSDFVKFEKSTVPKAVFFRKARSTISST
RTPMQLNKLQTPSSKKVTFGLNKNMTAEFKKTDKSILVSPEGPSRVAFNPEQKPRHGVLK
SPTVTPAKEPQMKRPFTMSAKKRPTAVDFF
NT seq 2253 nt   +upstreamnt  +downstreamnt
atggctcccgcggccgtgcagccgcccgaggtgcagttcgcgcagcgcttggccgccaac
gagaagcgcatccgagaccgcgccctcaaaaagctgcggggctacatcggcgtgcggagc
cagcgccccggcggtggcttcagtcaggaagaactgctgaaaatatggaagggccttttc
tattgtatgtggatgcaagataaacctctgcttcaggaggaacttgcagccaatatctcc
cagcttatccacgtgtttgagaatacagagactcgacacctgttcatccagacattttgg
cagacgatgaaccgggaatggaacgggattgacaatctgcgtctggacaagtactacatg
ctgatgcgtctgattttgaggcagtcctttgaagtgctgaaaagaaatgaatgggatgag
nnnnnngttgaaccattgctgcagctattaatgaaagaagttatggacccagacagcaat
tctcctactgggataaagttccatttcattgatatctatctggatgaattggctaaagtt
ggtgcaaaggagctcacagcagaccagaatctcaagttcatcgaacctttctgcaaaatt
gctgccaaatcaaaggaccggcgtgtgctccatgctgtggccaccggtgtctttgagatg
atcgtggatcagtcgcccttcgccatcgaggacctgatgaaagagctgggtgccaacagc
gatgaggagaatgtttctgaagaaggcaaagaggaaaatgaacagatgcttaaaaccaaa
gacagatctctgtcaggaaaatcagcacagaactctgaaaaaacagaggatatcaatgaa
aatgctgatgatgggattgggactgttcttcagtttgattacaaggctgtggctgacaaa
atctttgaatttgcaagcaagaaaaatacaccttccctgaacagaaagcggctgtacaag
ctggtcaaaaagttccaggacttagcagaaggaatcttcccccaagatattcctgaagat
gtttctacagatgaagatgatgatgaatccggtaggcgaaagcgaaagaaaaaagctgtc
aagccttggcagcaaaatgagctggaaaaagtaaaagaggataaagaagaactgtcaagt
gagaaggtgccatcagtttcccagagaaagaggaaaaaaaggaagaagagggtcagccta
agtattgattctggaacagatgatggaaattgtgaggagggaaaagctgaaacatctgga
tccaatgcttctagccaggaaaaggtgccagaaaataaaaaggagaggaagagaaagaaa
ttgctagtaaatgaggccagtgagaccacagatgtagcaactgacaccatagaaaatcag
agtatctctgagcagaacagtctgactgatgcggaacagagtaaaaagagtcagttgaag
aaaatgaatccaaaagtgcagaatgttcctgcaaaaccagcgtgtcagaatggaccagcc
actgccagtgcagcagaggatgccagcccgtgtgtcacacccttacctcctaaggctgtg
aaaaagaagcagaaagcaggagctgtcctggtgaatggggatccccctgtgcagcaaact
gacctgaaacccagcaaggaaggcttgctggggaccctgccaaaaaagggtgaatctgca
ccctccagaaaggtcatactgaagacaaagttagttggtttggaagggatgaaagtctcc
actcagaatgcagcagctctgaaaaagaagagaaaagtgaaagaggtcctaaactctgtc
gaagccaatggagttctggagactgtatgcaagaaaaacaggaaggtggaaagcagtgct
gctctgtcgccattaaagaaaaagaaagcgaaaccaggaagtgattttgtaaaatttgaa
aaatcaactgtaccaaaggcggtgttcttcaggaaagccagaagcaccatctcctccacc
aggacacccatgcagctgaacaaactgcagacacccagctccaaaaaagtcacgtttggc
ttgaataaaaacatgactgcagaatttaaaaagactgacaaaagcatattagtgagccca
gaaggaccctcccgtgtggctttcaatcccgaacagaaacctcgtcatggggtgctgaag
tcacccacagtgaccccagcaaaagagccccaaatgaagagaccatttacaatgtcagct
aagaagagaccaactgctgtggacttcttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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