KEGG   Lonchura striata domestica (Bengalese finch): 110476123
Entry
110476123         CDS       T05897                                 
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Pathway
lsr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110476123 (DHX36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsr03019]
    110476123 (DHX36)
Enzymes [BR:lsr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     110476123 (DHX36)
Messenger RNA biogenesis [BR:lsr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     110476123 (DHX36)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C DEAD Helicase_C HA2_N AAA_22 Sir1 ATPase nSTAND3 AAA_19 AAA_23
Other DBs
NCBI-GeneID: 110476123
NCBI-ProteinID: XP_021396504
Position
9:complement(757388..772609)
AA seq 985 aa
MSYEQRRERGRGRGRGRGRGGDGGAASAASSAAGGPGGRERHPGHLKGREIGMWYARRQG
QKNRDADRQQRAVVRMDERREEQIVQLLNSVQAKNDKEQEAMSWWSGDEEGPAPEQPAKV
KPDAEKAPVRQTPAWKKTSLDLDVEFLCEKTEQDADLDEQLKEDLMKKRSDPRYIEMQRF
REKLPSYGMREELVKLINSSRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIVCTQ
PRRISAISVAERVAAERAESCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDK
HLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDHCPM
IHIPGFTFPVVEYLLEDVIEKLRYTPEKTDRRQHWRKGFMQGHMSRPEKEEKEEIYRQQW
PGYLRQLQDRYSASTISALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNIST
LHELLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDV
VFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLL
DDYQLPEILRTPLEELCLQIKILRLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQ
EELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADA
RRKELSRNTKSDHLTVVNAFTGWEEARGCGLWNEKDYCWEYFLSSNTMQMLHNMKGQFAE
HLLAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKT
DGSVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDK
DQDTIAVDEWIVFQSPEKIANLVKKLRKELDDLLQEKIEKPHPVDWNDIKSRDTAVLTAI
IDLITTQENEGVRNFAPRFQGERYS
NT seq 2958 nt   +upstreamnt  +downstreamnt
atgagctacgagcagcgccgcgagcggggccgcgggcgcggccggggccggggccgcggc
ggcgatggcggcgccgcctccgccgcctcctccgcggccggcgggcccggcgggcgggag
cggcaccccgggcacctgaagggccgcgagatcgggatgtggtacgcccgccggcagggc
cagaagaaccgggacgccgaccggcagcagagagccgtggtgcgcatggacgagcgccgg
gaagagcagatcgtgcagctgctgaactccgtccaggcgaagaacgacaaagagcaggaa
gccatgtcctggtggtccggcgatgaggagggccctgctccagaacagcctgccaaagtg
aaaccagatgctgagaaagctcctgtcagacagacaccagcctggaagaaaacatccctg
gatttggatgtggaattcctctgtgaaaaaaccgagcaagatgctgatttagatgagcaa
cttaaagaagacttaatgaagaagagatctgatcccagatatattgaaatgcagagattc
cgagagaagctcccctcatacgggatgagagaggagctggtgaagctgatcaacagcagc
cgcgtgacggtgatcagcggcgagacgggctgcgggaagaccacgcaggtgacgcagttc
atcctggacgaccacatcgagcgcgggctgggctccacgtgccgcatcgtgtgcacgcag
ccgcgcaggatcagcgccatctccgtggctgagagagtggctgctgagagggcagagagc
tgtggcaatggcaggagcacggggtaccagatccgcctgcagagtcgcttgccaaggaag
caaggttcaattttgtactgtaccacgggaattgtcctgcagtggctccagtcagataaa
cacttgtccagcatcagtcatgtagttcttgatgaaatccatgaaagaaatctgcaatca
gatgttttaatgagcattattaaagatctcctgaatgttcggctggatctgaaagtcata
ctgatgagtgctactttaaatgcagagaagttttctgagtactttgaccactgcccaatg
attcacatccctggcttcactttcccagtggtggaatatctgctcgaagatgtcattgag
aagttgaggtacaccccggaaaagacagaccgccggcagcactggaggaagggcttcatg
cagggccatatgagcaggccagagaaggaggagaaggaggagatctacaggcagcagtgg
ccaggctacctaaggcagctgcaggacaggtattcagcaagtacaatcagtgccctggaa
atgatggatgatgacaaggtggacctggaccttatagcagcactgatcagacacattgtg
ctggaagaggaggatggtgccattctggtgtttctgccaggctgggataacatcagcact
ttgcatgagctcttgatgtctcaagtcatgtttaagtcagataggtttattatcatacct
ttgcattcactgatgcctacggttaaccagactcaggtgttcaagaagaccccgccagga
gtgaggaaaattgtgattgcaaccaacattgcagaaaccagcatcacaattgatgacgtc
gtgttcgttatagatggggggaagataaaggagactcactttgacacccagaacaacatc
agcaccatggcagcagagtgggtcagcaaagccaatgccaagcagaggaagggtcgagca
ggaagagttcagccaggccactgttaccatctgtacaacggactgcgtgccagcctcctg
gatgattatcagttaccagagatcctgaggacacccttggaagagctctgcttacaaatc
aagatcctgaggcttggtggaattgcctattttctgagcaaactgatggaccctccatct
cgtgatgctgtgatgttggccataaatcacctcatggagctgaacgctctggacaggcag
gaggagctgacgcccctgggggtgcacctggcccggctgcccgtggagccacacatcggg
aagatgatcctgtttggagccctgttctgctgcttggaccccgtgctgaccattgcagcc
agcctcagcttcaaggacccttttgtcatccctctgggcaaagagaaaatcgcagatgca
agaagaaaggagctgtcaaggaacacgaaaagcgatcatctgactgtggtgaatgctttc
actggctgggaagaggctcggggttgtggtctctggaatgagaaggactattgctgggaa
tatttcctgtcctcaaacaccatgcagatgctgcacaacatgaaagggcagtttgctgag
catctccttgctgctggatttgtgaatagtagaaaccccaaggatcccaaatctaacacc
aactcaggtaatgagaagctgctcaaagctgtcatctgtgctggcctctatcccaaagtg
gcaaagatccggcccagcttcagcaaaaagagaaaaatggtgaaagtttgcaccaagaca
gatggatcagttaatatccaccccaaatctgtgaatgtggaggaaacagagttccattat
aactggctcgtgtaccatttgaagatgaggaccagcagtatttacctgtatgattgtaca
gaggtgtctccatactgcctcttgttctttggaggggatatatccattcagaaggataag
gaccaggacaccatcgctgtggatgagtggattgttttccagtctccagaaaaaatagca
aacttggtcaagaaactgagaaaagaacttgatgatcttctacaagagaagatagagaag
ccccatccggtggactggaatgacattaaaagcagggacacggcagtgctgacagccatc
atagacttgatcaccacgcaggagaacgagggcgtcaggaacttcgcgccgcgcttccag
ggcgagcgctacagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system