KEGG   Lonchura striata domestica (Bengalese finch): 110476961
Entry
110476961         CDS       T05897                                 
Symbol
TUBB4B
Name
(RefSeq) tubulin beta-4B chain
  KO
K07375  tubulin beta
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Pathway
lsr04145  Phagosome
lsr04540  Gap junction
lsr04814  Motor proteins
lsr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110476961 (TUBB4B)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    110476961 (TUBB4B)
  09142 Cell motility
   04814 Motor proteins
    110476961 (TUBB4B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110476961 (TUBB4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lsr03036]
    110476961 (TUBB4B)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lsr04812]
    110476961 (TUBB4B)
   04147 Exosome [BR:lsr04147]
    110476961 (TUBB4B)
Chromosome and associated proteins [BR:lsr03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     110476961 (TUBB4B)
Cytoskeleton proteins [BR:lsr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    110476961 (TUBB4B)
Exosome [BR:lsr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110476961 (TUBB4B)
  Exosomal proteins of colorectal cancer cells
   110476961 (TUBB4B)
  Exosomal proteins of bladder cancer cells
   110476961 (TUBB4B)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 110476961
NCBI-ProteinID: XP_021397954
Position
17:4858642..4860965
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEEAE
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggagattgtgcacctgcaggccgggcagtgcgggaaccagatcggagccaagttc
tgggaggtgatcagcgacgagcatggcatcgaccccaccggcacctaccacggggacagc
gacctgcagctggagcgcatcaatgtctactacaacgaggccacaggcggcaagtacgtg
ccccgcgccgtgctggtggacctggagcccggcaccatggactcggtgcgctccgggcct
ttcgggcagatcttcaggccggacaacttcgtgttcggtcagagcggagcaggaaacaac
tgggcaaagggccattatacggaaggtgctgaattagtcgattctgtgttagatgttgtg
agaaaggaagctgaaagctgtgattgtctccagggctttcagcttactcactccctgggt
ggtggcaccggctctggcatgggtacccttctcatcagcaaaatccgtgaggagtaccca
gaccgaattatgaatactttcagtgtggtgccctcccctaaagtgtcagatactgtagta
gagccctacaacgccacgctgtcagtgcaccagctggtggagaacacggacgagacgtac
tgtatcgataacgaggcactctatgacatttgcttcagaacactgaagttaacgaccccc
acctacggtgatctgaaccacctcgtgtcagccaccatgagcggtgtcaccacctgcctg
cggttcccaggccagctcaacgctgacctgcggaagctggcagtgaacatggttcccttc
ccacgtctgcactttttcatgcctggttttgccccactcacgagccgtgggagccagcag
taccgggctctaaccgtgccagagctcacccagcagatgttcgatgccaagaacatgatg
gcggcgtgtgaccctcgtcacggccgctatctgaccgtggccgctgtctttaggggccgc
atgtccatgaaagaggtggacgagcaaatgctaaacgttcagaacaaaaatagcagctat
tttgttgaatggatccctaataacgttaagacagcagtctgtgacattccacctcgcggc
ctcaaaatgtctgccaccttcattggcaacagcacggccatccaggagctgttcaaacgc
atttctgagcagttcactgcgatgttccgcagaaaggccttcctgcactggtacacgggc
gagggcatggatgagatggagttcacagaggctgagagcaacatgaacgacctggtctct
gagtaccagcagtaccaggatgccacagctgaggaggagggagagtttgaggaggaagct
gaggaggaagcagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system