KEGG   Lonchura striata domestica (Bengalese finch): 110478578
Entry
110478578         CDS       T05897                                 
Symbol
PUS7L
Name
(RefSeq) LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog-like protein
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lsr03016]
    110478578 (PUS7L)
Enzymes [BR:lsr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     110478578 (PUS7L)
Transfer RNA biogenesis [BR:lsr03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    110478578 (PUS7L)
 Prokaryotic type
    110478578 (PUS7L)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-GeneID: 110478578
NCBI-ProteinID: XP_031363765
Position
1A:34982335..34993848
AA seq 721 aa
MLFRPSPFSLSARCGCGGPGGEXRAAMLPSFSYLGEHTGFRGTIKNSPRDFVVTELEVPE
LLLRDARAELLQESSEAPPAQSRPCPREPKKRRPEPPGPGALGCPRHAAPGPPGRGPSRA
GGGSAASPGRSQRERDPDLQPGPGEAPVLESLLGKPVSELLNKFACDVKDAWGLENNADA
GAREFSLGPRLDKKIRADLHSAVRQKYPFLVTVTKDNEMIVKGNPDYRELCQLVTEKETS
DFFKFLDAKLENSTFSFEPDGNKEHRKTVHHFINRKFGKLLETKSFTMTDANDQPNTSII
VRFREKSLSRKRCAGGFQKQDVYTAFTLQKENLETLEAIGLLAVELDVLPSDFSYTGIKD
KKAITLQPMVVKKVTPERLKEIGNKMEKKGMKIYNIRPAYQHLRLGQLKGNHFDIVVRDL
QHHSHDTSADLKERISEAVESVETKGFVNYYGPQRFGQGQIVQTDQIGLALLNEKMVKAV
KLFFMPEDTDDPVNNAKRYFLQTEDAKGTLVMLPEFKVREKMLLRALNRYGVNHEGCTKG
WLNIPHSLRIFYVHAYCSKIWNEAASYRLKTYGSKVVEGDLVFLEEIDESISLNDKVHVV
TASEESANKYSIYQVVLPMVGHSIKYPSNKVGQWYHERLSKDELELCKFRVSPLQLNIPG
CYRLILKNVQNLSYFLESSEKEIKIEDNHLNDLKVSLHISFDLDPSCYATVCLREIMKCH
F
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgctgttccggccctctcccttttccctctccgcccgctgcgggtgcggcgggcctggc
ggggagnncagggcagccatgctgccctccttcagttacctgggcgagcacaccggcttc
cgcggcaccatcaaaaactcgccgagggacttcgtggtgacagagctcgaggtgcccgag
ctcctcctcagggacgcccgagctgagctgctccaggagagcagcgaagcgccgccggca
cagagccgcccgtgtccgcgggagcccaagaagcggcggccggagccgcccgggcccggc
gccctcgggtgcccccggcatgccgcgcccgggcccccggggcgcggcccaagccgggcg
gggggcggctctgctgcatcccccggcagaagtcagcgtgagcgagaccccgatctgcag
cccggccccggggaagcccctgtgttggagtccttactcggcaagcccgtgagcgaactg
ctcaacaaatttgcctgcgatgtgaaggatgcgtggggcttggaaaacaacgcggatgct
ggtgccagggagttctcgctgggacctaggctggacaagaaaattcgagctgatttacac
agtgctgttaggcagaaatatccctttctagtcactgttacgaaagacaatgaaatgatt
gtaaaagggaatcccgattacagagaactttgtcagttagtaactgaaaaggaaacaagt
gatttctttaaatttttagatgcaaagctagaaaattctacgttttcttttgagcctgat
ggaaacaaagagcacaggaaaacagttcaccacttcatcaataggaaatttggaaagctt
ttagaaacaaaatcttttaccatgacagatgccaatgatcagccaaatacatcaataata
gtacggtttcgagaaaaaagtttgtccagaaaaaggtgtgctggtggttttcagaagcaa
gatgtttatacagctttcacccttcagaaagaaaacctagaaacactagaagcaattggc
ttgttggcagttgaacttgatgttcttccttcagacttcagttacactggcatcaaagat
aagaaggctatcactttgcagcctatggtggtgaagaaggtgactcccgagaggttgaag
gaaattggaaacaaaatggaaaaaaagggtatgaaaatatacaacatccgtccagcatac
cagcacctcagacttggtcagctgaagggtaatcattttgacatagttgtgagagatctc
caacaccacagtcatgacacttctgcagatttgaaggagagaatatctgaagcagtggaa
agtgttgagacaaaaggttttgtgaattactacggacctcagcgatttggacaaggacaa
attgttcagacagatcaaataggcttggctttactgaatgaaaaaatggtgaaagctgtg
aaattatttttcatgcccgaagatactgatgatcctgtaaacaatgcaaaaagatacttt
cttcaaactgaagatgcaaagggcacacttgtgatgctgccagaatttaaagtaagagag
aagatgttgctacgagctttaaatcgctatggtgtaaatcatgaaggttgtaccaaagga
tggctcaacattcctcactccttgcgcatattctatgtccatgcttattgcagtaaaatt
tggaatgaagcagcatcatataggctgaagacttatggctcaaaagtggttgagggtgat
cttgtcttcttggaagaaattgatgaaagcatttccctgaatgacaaggttcatgtagtc
actgcttctgaagaatcagctaacaaatattctatataccaagtggttcttccgatggtg
ggacacagtatcaagtatcccagtaataaagttggacagtggtaccatgaaagactttct
aaggatgagctggagttgtgcaaattcagagtgtctccattacagctaaatatacctgga
tgctacagactcattttgaaaaatgttcagaatctctcatatttcttggaaagtagtgaa
aaagagatcaaaatagaggacaaccatctgaatgatttaaaagtctctcttcatatatca
tttgaccttgatccttcatgttatgcaacagtctgtctgagagaaataatgaaatgtcat
ttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system