KEGG   Lonchura striata domestica (Bengalese finch): 110478677
Entry
110478677         CDS       T05897                                 
Symbol
SOCS7
Name
(RefSeq) suppressor of cytokine signaling 7
  KO
K04699  suppressor of cytokine signaling 6/7
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsr04121]
    110478677 (SOCS7)
Ubiquitin system [BR:lsr04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul5 complex
    Target recognizing subunit
     110478677 (SOCS7)
SSDB
Motif
Pfam: SOCS_box SH2
Other DBs
NCBI-GeneID: 110478677
NCBI-ProteinID: XP_031362914
Position
27:complement(79797..113214)
AA seq 579 aa
MQRDGDAAAAAAASYRVLSRLLGYGTGPEAGAAGGAGAGTGAGAAGGGRLPPGAGPALRS
PRPQLMVFRNAAAESRPGEDCGPAAAAAAAAGGGVPGGGGAELCPRHRCALEPKAAAGWG
AAARSGLELQLAALGLRPPGLAAKAAAGAPCPCLGPPAGEETSDALLVLEALEPDEGGSG
SEDEPGSPGRGAARAAGRTAGTGPAPPPAGTGTGPGGRKGSLRIRLSRLFRTKSCSGGSA
TGDAASAAASAGSLTDVCGARGREQEPGRKPRLTRTQSAFSPVVFSPLFTGETVSLVDVD
ISQRGLGSPQPPTPPPPPRRSLSLLDDFGGSLLPPVLLGPAGSSLQSFRPPPPPHAADAP
ARPAPLRPPEAPGQPSVPARPDPGSFAASLRELEKCGWYWGPMNWEDAEMKLKGKADGSF
LVRDSSDPRYILSLSFRSQGVTHHTRMEHYRGTFSLWCHPKFEDRCQSVVEFIRRATMHS
KNGKFLYFLRSRVPGLPPTPVQLLYPVSRFSNVKSLQHLCRFRIRQLVRIDHIPELPLPK
PLISYIRKFYYYDPQEEQYLALREAQLLSRQRQEPESST
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgcagcgcgacggggatgctgcggcggccgccgcggcctcgtaccgggtgctcagccgg
ctgctgggctatggcaccgggccggaggcgggcgcggcgggcggtgccggtgccggtacc
ggtgccggcgcggcgggcggcgggcggctgccgccgggggccgggccggcgctgcgcagc
ccgcggccgcagctgatggttttccgcaacgcggcggccgagagccggcccggcgaggac
tgcggcccggcggcggcggcggcggcggcggcgggcgggggcgtcccggggggcggcggg
gccgagctgtgcccgcggcaccgctgcgcgctggagcccaaagcggcggcgggctgggga
gcggcggcgcggagcgggctggagctgcagctggcggcgctggggctgcgcccgccgggg
ctggcggcgaaggcggcggcgggcgccccgtgcccgtgcctcgggccgcccgccggcgag
gaaaccagcgatgcgctgctggtgctcgaggcgctggagcccgacgagggcggcagcggc
tccgaggacgagccggggtcgccggggcgcggggccgcccgcgccgccggcaggacggcg
gggaccggccccgcgccgccgcccgcgggcaccggcaccggccccggcggcaggaagggc
tcgctccgcatccgcctcagccgcctcttccgcaccaagagctgcagcggcggctcggcc
accggggacgccgccagcgccgccgcctcggccgggagcctcacggatgtgtgcggggcc
cgcggccgggagcaggagccgggcaggaagccccgactgacgagaacccaaagtgccttt
tccccggtcgtgttcagccccctcttcacaggcgagacggtgtcgctggtggacgtggac
atttcccagcgagggctcggctccccgcagccgccgacgccgccgccgccgccccgccgg
agcctcagcctgctggatgattttggcggatcgctgctgcctccggtgctcctggggccc
gctggctcctcgctgcaaagcttccggccgccgccgccgccgcacgccgcagacgcccct
gcccggccggcgccgctgcggccgcccgaggccccggggcagccgagcgtcccggcccgg
cccgaccccggcagcttcgccgccagcctccgggagctggagaagtgcgggtggtactgg
ggccccatgaactgggaggacgccgagatgaagctgaagggaaaagccgacggatccttc
ctggtgcgggacagctccgacccccgctacatcctgagcctgagcttccgctcgcagggc
gtcacgcaccacacccgcatggagcactaccgggggaccttcagcctgtggtgccacccc
aagttcgaggaccgctgccagtccgtggtggagttcatcaggagggccacgatgcactcc
aagaacgggaaattcctctacttcctgcgctcccgcgtgccaggtctccctccgacgcct
gtccagctcctgtatcccgtctccaggttcagcaacgtcaaatccctgcagcacctttgc
cgcttccgcatccggcagctggtccggatcgaccacattcccgagctcccgctgcccaag
cccctgatctcctacatccgcaagttctactactacgacccgcaggaggagcagtacctg
gccctcagggaggcccagctcctctcccgacagaggcaggagccggaatcctccacgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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