KEGG   Lonchura striata domestica (Bengalese finch): 110478774
Entry
110478774         CDS       T05897                                 
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
  KO
K12172  E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Pathway
lsr03013  Nucleocytoplasmic transport
lsr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110478774
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110478774
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsr03019]
    110478774
   03110 Chaperones and folding catalysts [BR:lsr03110]
    110478774
   04121 Ubiquitin system [BR:lsr04121]
    110478774
Messenger RNA biogenesis [BR:lsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110478774
Chaperones and folding catalysts [BR:lsr03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Cyclophilin
    110478774
Ubiquitin system [BR:lsr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   110478774
SSDB
Motif
Pfam: Ran_BP1 Pro_isomerase IR1-M zf-RanBP WH1 VID27_PH TPR_1 TPR_2 TPR_14 TPR_8 TPR_16 TPR_7 TPR_11
Other DBs
NCBI-GeneID: 110478774
NCBI-ProteinID: XP_021401316
Position
1:complement(27346064..27379441)
AA seq 2995 aa
MMRRTKPEVERYVASLQAAAPSPREKSMKGFLFAKLYFEIKEYELAKRYISTYLNVQERD
PKAHRFLGQIYEAEGNIEKAFGCYKRSVELNPTQKDLVLKIAELLCNNDVTDGRAKYWVD
RAAKLFPGSPAIYRLKEQLLDCKGEDGWNQLFDLIQAELYARPDDIYINIRLVALYRSNN
RLKDAVLHCQEAEKRIPLQSSLEWCSCVVETLEEYLESLQDLEYDKNNWRTIKKDHLLAY
SSFVKLRLSSRDVQECREALESFDHVLQSVKPYVSVADELSRTYVEMKGQLYMHAGALLL
KMAQDNETQWRAMCELATLCYLLSFQVPKPKSKLIKGDQTGQDMLEMLACDRKSQSGHML
LNLSNGKQDFFKEVVESFANKSGSFALFDSLFESGTSRERSFIGTDDIGNVSTQAPVQME
LHKYDIGAIRLHNGSLQHLVWLGLQWNSMSVLPPMRKWLKQLFHLPQETSRLETDAPESI
CLLDLEVFLLGVIFTSNLQLQEKFNSHYSAHQPQFLPLPICKQLYTEKQRSWWDAVRTLL
QRKSVPGTAAKLRLIVQHGISTLRTLDKHGLQPALIIYWAKSLQKTGINLNSFYDQKEYI
GRSVYYWKKVLPMLEIIKKRRSISEPTDPLFKHFHSVDIQVFQVAAYEEDAQIAFAMLDA
VDGKTDDALIAFEAIENVVSYWNLAMIFQRKAEEIENDVMLPEEHEEHKTYLLKAKYYLM
KIIAESSSDMSVTEKLPVSLETVREVLDTVIQELGENGEEGSLAFRNGLPRTVDSAMKHS
TPSPTKFSFSPSKTYKFSPKTPPQWAEDHKSILQMICQQVEALKNEMQEMKLNNSNTNAS
PRWPAENYGTDAIPDNYQRAQNLHEAPLTVATTGPSVFYSQSPAYNSQYLLGTAATNVTP
AKPPVYGMNRLTPQPHIYSYQPPPMHTPPLQNTSGCMFSQEMYGPPLRFDSPGTTLISPR
TADDYYNYSVPQASTNPTLPKPGYFTNRSVTPPTLKPAEPKAMPKFGQPGAAEGSKPPLP
TPAQPSQPTTFKFKPNFKSNDGDFTFSSPPQVAPQPLNAPFNSKESLLDLLTSDKPLEDD
RYVEQKPVSDPTNSSRNIFSFSNKHIPGISLRENMGQNAHKNLGVEKSDAFGVQEPSKPV
FMASNSDLANRSHETEGGSTHGGDEDDDGPHFDPVVPLPDKIEVKTGEEDEEEFFCNRGK
LFRFDADSKEWKERGIGNVKILKHKVSGKFRLLMRRDQVLKICANHYINTDMKLTPNATS
DKSFVWHALDYADELPKPEQLAIRFKTPEEAMLFKKKFEEAQNILKSLGSSADTSVAQST
GTAKETANQDVKEPNRTTSGTMNLGFQFLKDGTSSERDSKGTLTATSTTSSTTISSGKDA
QQACSSGGFGQHLLKKDQWECKVCLVPNEATVKNCVSCQSPNSSMWETHGTPLTGSASLK
ASGNTVQDKFGSAFAKKEGQWECSVCVTQNEAKDVNCCSCQSPKPQNQTNTSTPSVQASV
ALGLGSIADTSKPQKNGFEGLFTKKEGQWDCTTCLVRNEGSSLACIACKTPNPSGKPAGE
TLPTPAFGLKSKLPDLDGGQLRTGFKFGLEQGKTPPFTFQVSSDTEAKPAKEGFSFSMQM
PADGFKFGIQESSKNTPKKDEPSKEHMTGFLKSIDEKDKKELPSDSGTAFQFQETADKEK
IDFVFGQNSNTSTFAEHAKNIPREGFQFGKKDPNFKGFSGAGEKLFSSQNSKTDQKANTS
ADLSEKDDDVYKTEDSDDIHFEPIVQMPEKVEPFTGEEDEKVLYSQRVKLFRFDPETSQW
KERGVGNLKILKNEVNGKVRILMRREQVLKVCANHWITTTMNLKQLSGSDKAWMWMANDF
SDGDAKLEQLAAKFKTPEQAEEFKQKFEECQRLLLDIPLQTPHKLVDTGRTAQLIQRAEE
MKCGLKDLKTFLTDDKTKLPEEESVNPVCTSSTSDLVIKPHAESTGPTLEWDNYDLREEA
LDDSVSSSVYASPLASSPVRKNLFRFGESTTGFSFSFKSALSPSKSPAKQNQSRTSVGTD
EDSDVTQEEERDGQYFEPVVPLPDLVEVTSGEENEQVVFSHRAKLYRYDKDANQWKERGI
GDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMNMQQMKGSDRAWVWTACDFADGER
KVEFLAVRFKLQDVADSFKQIFDEAKHAQERETLITPLSSRANTPKESPCGKNAVAVLEE
TTRERTDISHGEDTSDTTIEAAEVSNTSETPTKTVVSPPKFVFGSESVKSIFSNEKSKTF
TFGNTSATGSLFGFSFNPPRKNEGHIPASQNTAQKEMEVSEPPKITNATQKPVDSKVDNF
PASTQDGPSNFSFRILEKGFNFSLFKSNPMAFWTSTSSMQPDSKAEKTTVSEDDVLSDEV
VIVYELTPTPEQRALADFLKLPSTFFCYKNKPGYVSDEDDDEDYETAVKKLNGVLYPSDS
KEKKKGQGPVKAGLAKKSEFNTERECAATLEKKPASEEKDETKALQVPSTSVCGISTDTE
GNSLEDLKSEAKIQEMKVNEVVSSSDIVCTSKEEIPAPSKDEETVCVKSGSSSEESHSAT
ETVQVSQTSSRAEDKPVDLSTKKSDSDGSESTQENRIISFGFGNTAGLSFADLASKSSED
FAFGSKDKNFKWANTGATVFGDTTRKDEDCSDDEVVHSDDIHFEPIVSLPEVEVKSGEED
EEILFKERAKLYRWDRDVTQWKERGVGEIKILFHTQKKYYRILMRRDQVLKVCANHVITK
EMNLVPSDTSNNAFIWTATDYADGEVKVEQFAVRFKSQEMANSFKKMFEECQLSLSELQK
GHLSLAAGLSKDTNPVVYFEVSADDEPLGHITMELFANIVPRTAENFRALCTGEKGFGFK
NSRFHRIVTDFVCQGGDITNHDGTGGRSIYGTAFEDENFIVKHTGPGLLSMANKGRDTNN
SQFFITLKKAEHLDFKHVVFGFVKDGMDVVKKIESFGSPKGLVNGRIVITDCGQI
NT seq 8988 nt   +upstreamnt  +downstreamnt
atgatgaggcggacgaagcccgaggtggagcgctacgtcgcctccttgcaggccgcggct
ccgtcgcccagagagaaatcgatgaaaggattcctctttgctaagctgtactttgaaata
aaagaatatgaacttgctaaaagatatatatctacatacctcaatgtacaagagagagat
cccaaagcacacagatttcttggacaaatttatgaagctgagggtaacatagaaaaagct
tttgggtgctacaagcgttctgtggagttgaacccaacacagaaagatcttgtattgaag
attgcagagttactatgcaataatgatgttactgatggaagagcaaaatactgggttgac
agagctgctaagctctttcctgggagccctgctatttacaggttgaaggagcagttactg
gattgtaaaggtgaagatgggtggaatcagctttttgacttgattcaagcagaactttat
gcaagaccagatgatatctacataaacatcagactagttgcgctctatcgttcaaataac
agattaaaggatgctgtgctccactgtcaggaggcagagaagagaatacctttgcagtca
agcttggaatggtgttcctgtgttgtagagacacttgaggaatatctggaatctttacaa
gacttggagtatgataaaaataactggagaactatcaagaaagatcatctgctggcctat
tccagctttgtcaaactgagactttcttctagagatgttcaggagtgcagagaggcactt
gaaagttttgatcatgtgcttcagtcggtaaaaccatatgtgagtgtggctgacgagttg
tctcgtacctatgtggaaatgaaaggacagctgtacatgcatgctggagctttgctgctg
aaaatggcccaagacaatgagacacagtggagagctatgtgtgaactagcaacattatgt
tatctcctgagttttcaggttcctaaaccaaagtcaaaactcataaagggggatcaaacc
ggacaagatatgctagaaatgttggcctgtgatcgaaaaagccagtctggtcatatgctg
ctgaacttaagtaatggcaagcaagacttctttaaagaggttgtggaatcatttgcaaac
aagagcggctcatttgcattgtttgatagcctgtttgagagtggaacatctagagagagg
tcttttattggcacagatgatattggaaatgtcagtacacaagcaccagtgcaaatggaa
cttcacaaatatgatattggtgccattcgattgcacaatggcagtctccagcacctcgtg
tggcttggcttgcagtggaactctatgtcagtcttaccccccatgcgcaaatggttaaaa
cagctttttcacttgcctcaagaaacatcaagacttgagacagatgctcctgaatctatt
tgcctgttagaccttgaagtatttctacttggggtgatattcactagcaacttacaactg
caagagaagtttaattctcactacagtgcacatcagcctcaattcttaccattgccaata
tgcaaacaactctatactgaaaagcaaagatcctggtgggatgctgttcgtactctcctt
cagagaaaatcagtaccaggaacagcagcaaaactgaggcttattgtacagcatggcata
agtactctgcgaacactggacaagcatggccttcaacctgccttaatcatatactgggca
aaaagcttgcagaaaacaggaattaaccttaactccttctatgaccagaaggaatatatt
ggacgaagtgtctactactggaagaaagttctgcctatgctggaaattatcaaaaagagg
aggagtatttctgaacctactgatcctctcttcaaacacttccatagtgtagacattcag
gtctttcaggttgcagcgtatgaagaagacgcacagatagcatttgctatgttggatgca
gttgacggcaaaactgatgatgctttaatagcatttgaagctattgagaatgtagtgtca
tactggaatcttgccatgattttccaaagaaaagcggaagagatcgaaaatgatgtcatg
ttgccagaagaacatgaggagcataaaacttaccttcttaaagccaaatattatctaatg
aaaattattgcagaaagctcctcagatatgtcagttactgagaaattgccagtgtctctt
gaaactgtgagagaagtgttagatacagtgatccaggaacttggtgagaatggtgaagag
ggaagtctggccttcagaaatggtctgccacgaactgtagattcagcaatgaaacattcc
actccgtcaccaaccaaattctctttttcaccatctaagacctacaagttctctccgaaa
actccccctcagtgggcagaagaccataaatctatacttcaaatgatttgtcagcaagtg
gaagctttaaagaatgaaatgcaagaaatgaaacttaataattccaacacaaatgcatct
cctcggtggcctgctgaaaactatggaactgatgcaataccagacaattaccagagagca
caaaatcttcatgaagcccctttaacagttgctaccactggcccatctgtgttctacagc
cagtcacctgcctataactctcagtatcttttgggaactgctgcaactaatgtaacacca
gcaaagcctcctgtctatggcatgaaccgacttacgcctcagccacatatatattcctat
cagccaccacccatgcatactccacctttgcaaaacacttctggttgtatgttttctcaa
gaaatgtatggcccacctctgcgttttgattctcctggtactacactaatttctcctcgt
acagctgatgactattacaactacagcgttccacaggcaagcaccaatccaacactgcct
aaaccaggttatttcacaaaccgttcagtcacaccacccactttaaagcctgcagaacca
aaagcaatgcctaaatttggacagccgggagcagcagaaggatcaaaaccacctctgcca
acaccagcacagccaagtcagccgacaactttcaagtttaaacctaacttcaagtctaat
gatggggacttcactttttcttctccccctcaagttgcaccacagcctcttaatgcacct
tttaatagtaaagaaagcctcttggatcttctaacatctgataaacctttagaggatgat
agatatgttgaacaaaagccagttagcgatcccacaaacagttcaagaaatatcttcagt
tttagtaataaacatattccaggcatctctcttcgagaaaacatggggcaaaatgcacac
aaaaacctgggtgttgagaagagtgatgcatttggtgttcaagaaccaagtaagcctgta
tttatggcttcaaattcagatttggccaatagaagtcatgaaacagagggaggaagcacc
catggtggagatgaggatgatgacggtcctcattttgatcctgtggtgccacttcctgat
aagattgaagtaaagacaggtgaggaagacgaagaagagttcttctgcaacagaggcaag
ctctttcgttttgatgcagactctaaagaatggaaagaaaggggtattggaaatgtaaaa
atactgaaacataaagtgtctggcaaatttcgtctcttaatgagacgagaccaagtgctg
aaaatatgtgcaaatcactacataaatactgatatgaaattaactccaaatgctacctca
gataagtcattcgtgtggcatgctttagactatgcagatgaattgccaaagccagaacag
cttgcaattagatttaaaacacctgaagaagcaatgctcttcaaaaaaaagtttgaggag
gcacaaaatattttaaaatccttgggatcaagtgctgatacgtctgtggctcaaagcact
gggactgcaaaagaaacagcaaatcaggacgtcaaggagcccaacagaaccacttctgga
accatgaacttgggctttcagtttctaaaagatggaacaagcagtgaacgtgacagcaaa
ggcacccttacagctacatccaccacatctagcactaccatttcatctgggaaggatgct
cagcaagcctgttcttctggtgggtttgggcagcatctcttgaagaaggaccaatgggag
tgtaaagtatgtttagttccaaatgaagcaactgtaaagaattgtgtatcatgtcaaagt
ccaaattcaagtatgtgggaaacacatggcaccccattaactggctctgcaagtttgaaa
gcaagtggtaacacagtgcaggacaagtttggatctgcttttgctaaaaaggaaggtcag
tgggagtgctctgtatgcgtaactcaaaatgaagcaaaagatgtgaattgctgttcttgt
cagagtccaaaacctcaaaatcaaacaaatacatccacaccttctgttcaggcatctgtt
gcactggggcttggttccattgctgatacaagtaagccacagaaaaatgggtttgaaggg
ctttttactaagaaggaaggtcagtgggattgtactacttgtcttgtgaggaatgaaggt
tcttcactagcctgcatagcctgcaaaacgcctaatccatctggtaaaccagctggtgag
actttgccaactcctgcttttggcttgaaaagtaaattgcctgaccttgatggaggacag
ttgcgaacaggatttaagtttggtcttgagcaaggcaagacaccaccatttacgtttcag
gtttcttctgatactgaagctaagcctgcaaaggaaggatttagcttttcaatgcaaatg
cctgcagatggatttaaatttggaatacaggaatctagtaaaaatacccctaagaaagat
gagccatccaaagagcatatgactggtttcttaaaaagcattgatgaaaaagacaaaaag
gaactgccttcagacagtggaactgcattccaatttcaagaaacagcagacaaggagaaa
attgactttgtttttgggcaaaatagcaacacttctacttttgctgagcatgcaaaaaat
attcctagggaaggctttcaatttggcaaaaaggaccctaacttcaaaggcttttcaggt
gcaggtgaaaagctgttttcttcacagaattctaaaacggatcagaaggcaaacacatct
gctgaccttagtgagaaggatgatgatgtgtataagacagaggacagtgatgatatccat
tttgaacctatagttcagatgcctgaaaaagtagaaccgtttacaggagaggaagatgag
aaagtgttatactcccagagagtaaagctgttcaggtttgatccagaaacaagccagtgg
aaagaacgtggggtgggcaatctgaagattcttaaaaatgaagttaatggcaaagtaaga
atactgatgcggcgtgagcaggtactgaaggtctgtgcgaatcactggataacgacaaca
atgaacttgaaacagctgtctggctcagacaaagcatggatgtggatggccaatgacttt
tctgatggtgatgcaaagctggaacagctggcagcaaaattcaagacaccagagcaggct
gaggagttcaaacagaagtttgaagaatgtcagaggctactccttgatatacctctgcag
acaccccataaacttgttgatacaggtaggacagctcagcttatacagagagcagaagaa
atgaagtgtggcttaaaagatctcaaaacttttctgacagatgacaaaactaaactgcca
gaagaggaaagtgtaaaccctgtttgtaccagcagtacttctgatttggttataaagcca
catgctgaaagtacaggccctactctggagtgggataactatgacttgcgtgaagaagct
ttagatgatagtgtaagtagttctgtatatgcatcgcctcttgcaagtagccctgtaagg
aaaaatctgtttagatttggagaatctaccactggttttagtttcagctttaaatctgct
ttgagcccatccaaatctcctgccaaacagaatcagagtagaacatcagtcggcacagat
gaagattctgatgttactcaagaagaggaaagagatggacagtactttgaacctgtggta
cctctgcctgatcttgtggaagtgaccagtggtgaggaaaatgagcaagttgtcttcagt
catagagccaaactctacagatatgataaagatgcaaatcaatggaaagagcgagggatt
ggagatatcaagatattgcagaactatgacaacaaacaagttcgtatagtaatgagaagg
gaccaggtactaaaactctgtgccaatcacaggataacaccagacatgaatatgcaacaa
atgaaaggatctgatagagcctgggtatggactgcatgtgactttgcagatggggaaaga
aaagtagaatttctggctgtgcgatttaagctgcaagatgttgcagactcatttaagcaa
atttttgatgaagcaaagcatgcccaagagagagagacgctgataacacctctttcttct
cgtgccaatacaccaaaggaatctccatgtggcaaaaatgctgtagctgtgttagaagaa
acaaccagagaaagaactgacatcagccatggtgaggatacttctgacacaactatagag
gctgcagaggtgtcaaatacttctgaaacaccaacaaaaacagtggtttctcctccaaag
tttgtatttggctctgaatctgtcaagagcattttcagtaatgaaaagtcaaagacattc
acatttggaaatacttcagccactggttctctctttggcttcagttttaatcccccaaga
aagaatgaaggccatattccagcatctcagaacacagcacagaaagagatggaagtctct
gaaccaccaaaaataacaaatgctactcaaaagcctgtagacagcaaggtagacaacttt
ccagcttcaacacaagatggaccgtctaacttctcatttagaattctggaaaaaggattt
aattttagcctctttaaatctaatcccatggccttttggacaagcacatcctccatgcaa
cctgatagtaaagctgagaagaccacagtgtcagaggatgatgttctatctgatgaggtt
gtaatagtttatgagttgacacctactcctgaacagagagctcttgctgacttcctcaaa
ctcccttcaacattcttctgttacaagaataagcctggatatgtgagtgatgaggatgat
gatgaagactatgaaacagctgttaaaaaacttaatggagtactctatcctagtgattca
aaagagaaaaagaaagggcaaggtccagtaaaagcaggccttgcaaaaaaaagtgaattc
aacactgaaagagaatgtgctgctactttggaaaagaaaccagcttctgaggaaaaagat
gaaacaaaagctctgcaggttccttctacatctgtttgtggtatcagtactgatactgaa
ggcaacagtctagaagacttaaagtcagaagctaaaattcaagaaatgaaagtgaatgaa
gttgtaagctcaagtgacatagtgtgtaccagtaaggaagaaatacctgctccatcaaaa
gatgaagagacagtatgtgtcaaatcgggttccagcagtgaagaatcacattctgccaca
gaaactgtgcaagtatcacagacctcatcacgagctgaagacaaacctgtagatttgtca
actaaaaagagtgattcagatggttcagagtcaacacaagaaaacagaatcatctcattt
ggttttggcaatactgcaggcctgtcatttgcagatctggcatccaaaagttctgaagac
tttgcttttggctcgaaagataaaaacttcaaatgggcaaatacaggagcaactgtgttt
ggagataccacccgtaaagatgaagattgtagtgatgatgaggtagtacatagtgatgat
atccactttgagccaattgtgtccttaccagaggtggaggtaaaatctggagaagaagat
gaagaaattctcttcaaggagagggcaaaactttacagatgggacagagatgttactcag
tggaaggagcgtggtgttggggagatcaaaatactcttccatacacagaagaaatactat
agaatcctaatgagacgagaccaggttcttaaagtctgtgcaaaccatgttatcaccaaa
gaaatgaacttggtgccctctgatacatcaaacaatgctttcatttggacagccacagat
tatgctgatggtgaagtgaaagtagagcaatttgcagtcagatttaaaagccaagaaatg
gccaattctttcaagaagatgtttgaagaatgccagttaagcttgtcagaactacagaag
gggcacttgtctttagcagcaggactgtcaaaggacaccaaccctgttgtatattttgaa
gtttctgctgacgatgaacctttaggacacataaccatggagctgtttgcaaatattgta
cctcgaactgctgaaaatttcagagccctgtgcacaggagagaaaggatttggattcaag
aactcccgctttcacagaatagtcacagactttgtgtgtcagggaggagatataactaac
catgatggaacaggtggacggtcaatttatggaacagcatttgaagatgagaatttcata
gtgaaacatactggtcctggattgttgtcaatggcaaataagggcagggatacaaataat
tctcagttcttcataacacttaaaaaagcagaacacttggacttcaagcatgtggtattt
gggtttgtgaaagatggaatggatgttgtgaaaaagatcgaatcctttggttctcctaaa
gggctagtaaatggaagaattgtcattacagactgtgggcaaatatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (13)   
   Pfam (13)   
All databases (27)   

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