KEGG   Lonchura striata domestica (Bengalese finch): 110480669
Entry
110480669         CDS       T05897                                 
Symbol
TSC2
Name
(RefSeq) tuberin
  KO
K07207  tuberous sclerosis 2
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Pathway
lsr04115  p53 signaling pathway
lsr04140  Autophagy - animal
lsr04150  mTOR signaling pathway
lsr04218  Cellular senescence
lsr04910  Insulin signaling pathway
lsr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    110480669 (TSC2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110480669 (TSC2)
  09143 Cell growth and death
   04115 p53 signaling pathway
    110480669 (TSC2)
   04218 Cellular senescence
    110480669 (TSC2)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    110480669 (TSC2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110480669 (TSC2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lsr01009]
    110480669 (TSC2)
Protein phosphatases and associated proteins [BR:lsr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110480669 (TSC2)
SSDB
Motif
Pfam: Tuberin DUF3384 Rap_GAP Cnd1
Other DBs
NCBI-GeneID: 110480669
NCBI-ProteinID: XP_021404457
Position
14:12786689..12820459
AA seq 1823 aa
MAKPQSKDSGLKEKFRNLLGLGTSRGSSKSSEGKQTEFIITAEILKELSIECGLSNRIRA
IGQICEVAKTKKIEEHAVEAVWKVVADMLQPERPAEARHAVLHLLKSIVQGQGERLGILR
AHFFKVIKDYPSNEDLHERLEVFKALTENGRYITYLEEELADFVLQWMDVGLTSEFLLVL
VNLVKFNSCYLEDYVADMVHKICLLCIQTSSSMDIEISLQVLDAVVCYNCLPSENLPVFI
ITLCRTINVKELCEPCWKLMRNLLGTHLGHSAIYNMCRIMEDRSYMADAALLRGAVFFVG
MALWGAHRLNSLRNSPTSVLPSFLKAMTCPNAVVSYEIVLSITRLIKKYGKGLQAVTWDI
LLDIMERLLQQLQVLESQELKSIVHDLLTTVEELCDQNDFHGSEERFFELVERCADQRPE
SSVLNLITYRAQSIHPAKDGWIHNLQLLMERFFRNESRSAVRIKVLDVLSFVLSINRQFY
EEELINLVVISQLAHIPEDKDHQVRKLATQLLVDLAEGCNTHHFNSLLDIIAKVAAHSLS
SPSELEERDLLSYSASLEDVKTAVLGLLIILQTKLYSLPSSHATRVYEMLIQHVQRHYKY
SYSLPVASSIRLQVFDFLLMLRADSLHRLGLSNKDGAVRFSPYCLCDFVEAEKRASEKKP
PGTLSPPSGSPSVPSQGGTVRVGHLPYSMVFGVLLQCLKQETDWKVLKLVLNKLPESLRY
KVLFLTSPCNIDQLASALSYMLTDKKTTDRLHGTPEGFSRTDLHLAVVPVLTALISYHNY
LDKAKQREIVYCLEHGLIYRCANQCVVALSVCSVEMPDIIIKALPVLIVKLTHISATANM
AIPLLEFLSTLARLPHLYRNFAAEQYASVFAISLPYTNPSKFNQYIVCLAHHVIAMWFIR
CRLPFRKDFVPYITKGLRSNVLLSFDDTPEKDSFRARSTSLNERPKSSLRLAKNAKQGLN
NSPPVKELKEPSAVDAFRSRSISVSEHVVRSRIQTSITSSSLGSADENSMAQADDNLKNL
HLELTETCLDMMARYVFSNFTAVPKRSPVGEFLLAGGRTKTWLVGNKLVTITTSVGTGTR
SLLGLDSGEFQSTPESSSDPVLQVRQTKEAPAKLESQAGQQVCRSSRSRVRSMSGGHALR
VGALDSSASHFPSGSTSQGTQGPPAAAARPEKASPAPQTALQKEKANLAAYVPLLTQGWA
EILVRRPTGNTSWLMSLENPLSPFSSDINNMPLQELSNALMAAERFKEHRETALYKSLSV
PSSSLATGTAKPSLLQRSNTVASFSSMYQSSCQGKLHRSISWAESAVVLEEGSPGEMELR
EAESPAESPESEDTETSCSEHVLSEERFGKAQDSYSRSSSTSSQEEKSLRSEELAEGGIP
IGRALEELSFQPSQPLSKSSSSPELQTLQEVLKDANGREVPRRLSTEAKSKSQSGNLEGE
GLGGWLGSGEDGRAAGPGAGGAAAASPRSPSGHRPRGYTISDSAPSRRGKRIDRDAFKGR
AAASNAEKVPGINPSFVFLQLYHSPFFGDENNKPLLLPNETFERSVQLLDQIPSYDTHKI
AVLYVGEGQSNNEIAILSNEHGSYRYTEFLTGLGKLIELKDCQPDKIYLGGLDVCGEDGQ
FTYCWHDDIMQAIFHIATLMPTKDLDKYRCDKKRHLGNDFVSIVYNDSGEDFKLGTIKGQ
FNFVHVIITPLDYDCNLVTLQCRKDMEGLVDTSVAKIISDKNLPFVARQMALHANMASQV
HHSRSNPTDTYPSKWIARLRHIKRLRHRLREETQYQSPGLPLQLHPSAPTKPPPQIPQDP
PPTYETGQRKRLISSVDDFTEFV
NT seq 5472 nt   +upstreamnt  +downstreamnt
atggcaaagcctcagagcaaggattccgggctgaaggagaagttcaggaacctcctgggg
ctgggaacatcccgggggagttccaagtcatcggagggcaagcagacagagtttatcatc
actgcagaaatactcaaggaactaagcatagagtgtggattgagtaacaggatacgagca
atcggtcaaatttgtgaagtggcaaaaaccaaaaaaattgaagagcacgccgtggaggcc
gtgtggaaggtggtggctgacatgctacaaccggagcgtcccgccgaggccaggcacgcc
gtgctccacctgctcaagtccatcgtccagggacagggtgagaggctggggatcctcaga
gcccatttttttaaggtgattaaggattatccctccaatgaagatctgcacgagcggctg
gaagtgttcaaggctctgacggagaacggacgctacatcacctacttagaggaggagctg
gctgattttgtgctacagtggatggatgttgggctgacttctgagttcctcctggttctg
gtgaacctggtgaaattcaatagctgctatctggaagactatgtagctgacatggtccac
aagatctgcctcttgtgcattcagacttcatcatctatggacatagagatttccttgcaa
gtcctggatgcagttgtttgttacaactgcctgccctcggagaacctgcccgtgttcatc
atcaccctgtgccgcaccatcaacgtgaaggagctctgtgagccctgctggaagctcatg
cggaacctcttgggaactcacctgggacacagtgccatctacaacatgtgcaggatcatg
gaagacagatcctacatggcagatgcagccctgctgagaggagctgtgttctttgttggg
atggctctgtggggggctcatcgcctcaattccctcaggaactcccccacttcagtgctg
ccttcattcctcaaggccatgacctgtcccaacgcagtcgtgtcctacgagatcgttctg
tccatcacacgcctgatcaagaaatatggcaaggggctgcaggctgtgacctgggatatc
ctcctggacatcatggagaggctgctgcagcagctgcaggttctggagagccaagaactg
aagtccattgtacatgatcttttgaccacagtagaagaactctgtgaccagaatgatttt
catggctctgaagagagatttttcgagctggtggaaagatgtgctgatcagagaccagaa
tcttctgtgttaaacctgataacatacagagctcagtccatccaccctgccaaagatggc
tggatccacaacctgcagctcttaatggagaggttcttcaggaacgagagccgtagtgct
gttaggattaaagttctggatgtgctgtcctttgtgctgagcatcaacagacagttctat
gaggaagagctgataaacctggtggtgatctcccagctggctcacatcccagaggataaa
gaccatcaggtccgaaaattggccactcagctgctggtggacctggctgaaggctgcaac
actcaccacttcaacagcctgctggatatcatagccaaggtggctgcacattctctgtca
tctccttctgaactggaagagagggacttgctgtcatattcagcttctctggaggatgtc
aagacagcagttcttgggctcctgataattcttcagaccaagctgtacagtttgccctcc
agccacgccacgcgcgtgtacgagatgctgatccagcacgtccagcgccactacaagtac
tcctacagcctccccgtggccagcagcatcaggctgcaggtgtttgatttcctgctgatg
ctccgagctgactccctgcaccgcctcggcctttccaacaaggatggagcagtgaggttc
agcccctactgcctctgtgattttgtagaggcagagaaaagggcttctgagaaaaagccc
cctggcaccctgtccccaccttcaggcagccccagtgtgccttcccagggtggcaccgtc
cgggtgggacacctgccctactccatggtctttggggtcctcctgcagtgtttgaagcag
gagacagactggaaggtgctgaagttggttctcaacaaattacccgaatctctccgctat
aaagtgctatttttaacttctccttgcaacatagaccagctggcctctgcactgagctac
atgctcacagacaagaagaccacggacaggctccacgggacccccgaaggcttttcccgc
acggatttgcacctggctgtggtccctgttctgacagcactgatatcttaccacaactac
ctggacaaagccaagcagcgagagatcgtgtactgcctggagcacgggctcatctaccgc
tgtgccaaccagtgcgtggtggcactgtcagtctgcagcgtggagatgcccgacatcatc
atcaaggcactgcccgtcctgattgtcaaactcacccacatttctgccacagccaacatg
gccatccctctgctggaatttctgtcgactctggccaggctgcctcacctgtaccggaac
ttcgcggcagagcagtacgccagcgtcttcgccatctccctgccctacacaaacccctcc
aagtttaaccagtacatcgtgtgcctggcccaccacgtgattgccatgtggttcatccgc
tgccgcctgcccttccgcaaggacttcgtcccctacatcaccaagggcctgcgctccaac
gtgctcctgtccttcgatgacaccccagagaaggacagcttcagggctcgcagcaccagc
ctcaacgagaggccaaagagtagtttaagactagccaaaaatgcaaagcaaggcttgaat
aactctcctccagtgaaagagctgaaagaaccctctgcagttgatgccttccgatcccgc
agcatcagtgtgtctgaacatgtggtccgcagccgcatccaaacgtccatcaccagctcc
agcctgggctctgcagatgaaaactccatggctcaggctgatgacaacttgaaaaacctg
cacctggagctgacagagacctgcctggacatgatggctcgatacgtcttctccaacttc
actgctgtgcccaagaggtctcctgtaggtgagtttctgctggctggaggaaggaccaag
acgtggctggttggtaataagctggtgaccatcactacaagtgttggaacagggacaagg
tccctgcttggcctggactctggagaattccaaagcaccccagaatcaagctcagaccct
gttctgcaagtgagacagaccaaggaggctccagccaagctggaatcccaggctgggcag
caggtttgcaggagctcccgcagcagagtccgatccatgtcgggtggtcatgccttacgt
gttggtgccttagacagctcagcctcccattttcccagtggctcaacttcccaagggaca
cagggccctcctgctgctgcagcccgcccagagaaggccagtcctgctccacagacagcc
ctgcagaaggaaaaagccaacttagctgcctacgtgccactgctgacccagggctgggca
gagatcctggtgcgcaggcccacaggcaacacgagctggctgatgagcctggagaacccg
ctgagccccttctcctcagacatcaacaacatgcccctgcaggagctctccaacgccctg
atggccgcagaacgcttcaaggagcaccgggagacggctctgtacaaatccctgtccgtg
ccctcctccagcctggccacgggcacggccaagccctcgctgctgcagcgctccaacaca
gtggcctctttctcttccatgtaccagtccagttgtcaagggaagttgcacaggagcata
tcctgggcagaatccgccgtggtgctggaggagggcagcccgggggagatggagctcagg
gaggccgagtcccccgccgagtcccccgagagcgaggacacggagacctcatgttccgag
cacgtcctgagcgaggagaggtttggaaaagcccaggactcgtacagcaggtcctcctcc
acgtccagccaggaggagaagtcgctgcggtcggaggagctggcggagggcggcatcccc
atcgggcgggcgctggaggagctctccttccagccctcacagcccctcagcaagtccagc
tcctcgccggagctccagacgctgcaggaggtgctcaaggacgccaacgggcgcgaggtg
ccccggcggctgagcacggaagcgaaatccaagtcgcagtcggggaacctggaaggggaa
gggctgggcggctggctgggcagcggggaggacggcagggcggccgggccgggcgctggc
ggcgcggccgccgcctcgccccgctcgccctcgggccaccggccccgcggctacaccatc
tccgactccgcgccctccaggaggggcaagaggatcgacagagacgccttcaagggcagg
gcagcggcgtccaacgccgagaaagtgcctgggataaaccccagctttgtgtttttacag
ttgtaccactcccccttctttggtgatgaaaacaacaaacccctcttgttgccaaatgag
acgtttgagaggtcagtgcagctcctggatcagatcccatcctatgacacacacaagatt
gcagtgctctacgttggggagggccagagcaacaacgagatcgccatcctgtccaacgag
cacggctcctaccgctacaccgagttcctcacgggcctgggcaagctcatcgagctcaag
gactgccagccagacaagatctacctgggtggcctggatgtgtgtggggaggatggacag
ttcacctactgctggcatgatgacatcatgcaagccattttccacattgccactctgatg
cccacaaaggatttggataaataccgctgtgacaagaagaggcacctggggaatgatttt
gtttccattgtttacaatgattctggagaggattttaagctgggcacaataaaggggcag
ttcaattttgtccatgtgatcatcacccctctggactacgactgtaacctggtgacgctg
cagtgccggaaagacatggagggtctggtggacacgagtgttgccaagatcatctctgac
aagaacctgcccttcgtggcccgtcagatggctctgcatgccaacatggcttcccaggtc
caccacagcagatccaaccccacggacacctacccctccaaatggatcgcgaggctgcgc
cacatcaagaggctgcggcaccggctccgtgaagagacacagtaccagagccctggcctc
cccctgcagctgcacccctctgcccccaccaaaccccctccccagatcccccaggacccc
cctcccacctacgagacggggcagaggaagaggctgatctcctccgtggacgacttcacc
gagtttgtgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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