KEGG   Lonchura striata domestica (Bengalese finch): 110480929
Entry
110480929         CDS       T05897                                 
Symbol
ABCE1
Name
(RefSeq) ATP-binding cassette sub-family E member 1
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lsr03009]
    110480929 (ABCE1)
Ribosome biogenesis [BR:lsr03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    110480929 (ABCE1)
SSDB
Motif
Pfam: ABC_tran RLI SMC_N AAA_21 Fer4 AAA_22 AAA Fer4_6 AAA_16 RsgA_GTPase AAA_29 AAA_15 VapE-like_dom nSTAND3 NACHT AAA_30 Rad17 Fer4_9 Fer4_10 Fer4_2 SRP54 Fer4_7 TsaE Fer4_21 Fer4_4 AAA_24 Fer4_16 AAA_23 AAA_5 Fer4_3 AAA_19
Other DBs
NCBI-GeneID: 110480929
NCBI-ProteinID: XP_021404956
Position
4:complement(14662431..14680336)
AA seq 599 aa
MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTSQSKIAWISETLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA
KGTVGSILDRKDETKTQTVVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMF
DEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEF
ELSIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLTPDEGGEVPVLNVSYKPQKISPKS
TGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
KNTLANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggcagacaaattaacaagaattgctatagtcaaccatgacaaatgtaagccaaagaaa
tgccgtcaggaatgcaagaagagctgtcctgtggttcgaatgggaaaactttgcatagaa
gtcacatcgcagagcaaaatagcatggatttcagaaacactttgtattggttgtggtatt
tgcatcaagaaatgtccttttggagccttgtcaattgttaacttacctagcaacctggag
aaagaaacaacacatagatactgtgccaatgcctttaaacttcacaggttgcctatccct
cgtccaggtgaagtactgggattggttggaaccaacggtattggaaaatcaactgccttg
aaaattttagcaggaaaacaaaagccaaatcttggaaaatatgatgatccacctgactgg
caagaaattttgacttacttccgaggatctgaactacaaaattattttaccaagatcctg
gaagatgaccttaaagctatcattaaacctcagtacgtggaccagatccctaaagctgca
aagggaacagtgggatcaattctggataggaaggatgaaactaagacacaaactgttgta
tgtcagcagcttgacttaacacacctgaaagaaagaaatgttgaagacctttcaggagga
gaacttcagagatttgcatgtgcagttgtttgcattcagaaggctgatatcttcatgttt
gatgaaccttccagctacttggatgtcaagcagcgcttgaaggctgccattactattcgg
tccctcataaaccctgacaggtacattattgttgtagagcatgatctaagtgtgttagat
tatctctctgactttatctgctgcctgtatggtgtgccaagtgcttatggtgttgttacc
atgcctttcagcgtaagagaaggcataaatattttcctagatggctatgttccaacagaa
aatctaaggtttcgagatgcatctctggtatttaaagtagctgaaacagctaacgaagaa
gaggttaaaaagatgtgtatgtacaaatatccaggaatgaaaaaaaagatgggagaattt
gaactatccattgtagctggagaattcactgattctgaaattatggtgatgttaggggaa
aatggaactggcaaaacaacatttatccgaatgcttgcaggaagacttacacctgatgaa
ggaggtgaggttccagtcctaaatgtcagctacaaaccacagaaaatcagccctaaatct
acgggaagtgtccgtcagctgctgcacgagaagatcagagatgcctatacacacccccag
tttgtaactgatgtgatgaaacctcttcagatagaaaacatcattgaccaggaggttcag
acgctgtctggtggcgagttgcagcgtgtggcattagctctttgtctgggtaaaccagca
gatgtatatctgattgacgagccctcagcatatctggactctgaacagcgtctgatggct
gccagagtcattaaacgtttcattctccatgctaaaaaaacagcttttgtggtagaacat
gattttatcatggctacgtatcttgctgatcgtgtgattgtttttgatggcattccttcc
aagaacacactggcaaacagtccacagactcttttggctggaatgaataagtttttatct
cagcttgaaatcacttttagaagagaccccaacaactacagaccaagaataaacaaactc
aattccatcaaggatgtggaacaaaagaagagtggaaactacttcttcctggatgactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (31)   
   Pfam (31)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system