KEGG   Lonchura striata domestica (Bengalese finch): 110481186
Entry
110481186         CDS       T05897                                 
Symbol
PPP2R5C
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Pathway
lsr03015  mRNA surveillance pathway
lsr04110  Cell cycle
lsr04114  Oocyte meiosis
lsr04261  Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110481186 (PPP2R5C)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    110481186 (PPP2R5C)
   04114 Oocyte meiosis
    110481186 (PPP2R5C)
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    110481186 (PPP2R5C)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lsr01009]
    110481186 (PPP2R5C)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsr03019]
    110481186 (PPP2R5C)
   03036 Chromosome and associated proteins [BR:lsr03036]
    110481186 (PPP2R5C)
Protein phosphatases and associated proteins [BR:lsr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     110481186 (PPP2R5C)
Messenger RNA biogenesis [BR:lsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     110481186 (PPP2R5C)
Chromosome and associated proteins [BR:lsr03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     110481186 (PPP2R5C)
SSDB
Motif
Pfam: B56 MvaI_BcnI
Other DBs
NCBI-GeneID: 110481186
NCBI-ProteinID: XP_021405346
Position
5:complement(10982683..11058907)
AA seq 577 aa
MPNKNKKEKEPAKSVKSGKSGKDGQDNQEHEVSNKKSNSTPPPAQLSKIKVPAPQTVVKK
EKRQSSSRFNVSNNRELQKLPALKDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKE
VKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTL
EAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLH
RIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFL
LKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNE
LEEILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKIL
PIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKLKERE
EAWVKIENLAKSNPQYPTYSDTSLLNSPVAMETDGPLIEDLQTLKKTVKEEACQAQKDQK
KDRPLVRRKSELPQDIYTMKALESHCRADELISHDGH
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgccgaataaaaacaagaaggagaaagaacctgcaaaatcagtcaagagtggaaaaagt
ggcaaagatgggcaagataaccaagaacatgaggtgtcaaacaaaaaatcaaatagcact
cctcccccagcacaactatctaaaatcaaagtaccagcaccacagactgtagtgaagaag
gaaaagcgtcagagttcttcaaggtttaatgttagcaataacagggagcttcaaaaactg
ccagctttaaaagatgttcctccagcggatcaagaaaagctttttatccagaagttacga
caatgttgtgtactttttgactttgtttctgatccactaagtgacctaaagtggaaggaa
gtaaaacgagcagctttaagtgaaatggtagaatatatcacacacaatcgcaatgtgatt
acggaacctatttaccctgaagtagtacatatgtttgcagttaatatgtttcgaacatta
ccaccatcttccaatccaacgggagcggaatttgatccagaggaagatgaaccaacctta
gaagctgcatggcctcatctacagcttgtttatgaatttttcttaaggtttttagaatct
ccagattttcaacctaatatagctaagaaatatattgatcagaagtttgtattacagctt
ttagagctctttgacagtgaagatcctcgtgaaagagattttcttaaaacaactctacac
agaatatatgggaaattcttaggcttaagagcttacatccggaaacaaattaataatata
ttttataggtttatttatgaaacagaacatcacaatggcatagcagaattactggaaata
ctggggagcataattaatggatttgccttaccattaaaagaagagcacaaaatattccta
ttgaaggttttgttaccattgcacaaagtgaaatcactcagtgtctaccatccacagctg
gcatactgtgtagttcagtttttagaaaaggacagcacacttacagaaccggtggtaatg
gcactgctgaaatactggccaaagactcacagtccaaaagaagtcatgtttttaaatgaa
ctagaagaaattttagatgttattgagccatctgaatttgttaaagttatggaacctctc
ttcagacagctagccaaatgtgtgtccagtccacactttcaggttgcagagcgagcatta
tactactggaataatgaatatattatgagtttaattagtgataatgcagcaaagattttg
cccatcatgtttccatccttgtaccggaattcaaagacgcattggaataagacaatacat
ggcttgatatacaatgctctgaaactcttcatggagatgaaccaaaaactgttcgatgac
tgcacacagcaatttaaagcagaaaaactgaaagagaagctaaaattgaaggaaagggaa
gaagcatgggttaaaatagaaaatctagccaaatcaaatccccagtacccaacatacagt
gacacgagtttgctgaacagtcctgttgcaatggaaacagacgggcctttaattgaagat
ttgcagacgctgaaaaagacagtgaaagaagaggcttgtcaggcacaaaaagatcagaaa
aaagatcgtcctcttgtgcgacgcaagtcagaactgcctcaggatatctataccatgaaa
gccttggaatcacattgcagagctgatgaattaatatcacatgatgggcattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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