KEGG   Lonchura striata domestica (Bengalese finch): 110481702
Entry
110481702         CDS       T05897                                 
Symbol
HNRNPU
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
  KO
K12888  heterogeneous nuclear ribonucleoprotein U
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Pathway
lsr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110481702 (HNRNPU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lsr03041]
    110481702 (HNRNPU)
Spliceosome [BR:lsr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    110481702 (HNRNPU)
SSDB
Motif
Pfam: AAA_33 SPRY SAP SRP54 SAP_new25
Other DBs
NCBI-GeneID: 110481702
NCBI-ProteinID: XP_021406129
Position
3:complement(32334922..32349471)
AA seq 840 aa
MSCSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDQEEAGGGGPASGAAEPG
NGSVEGEAAESGGGAAQLRQGGGPGQAAASAMEDDDEEGLEAADGDAMELGEENGERAGA
GGGPMEEEAGGEEEEEEEEDDENGDDQGFQEGEDELADEEEAAAGDANGHGDQQPPQPQQ
PQQPPPLLPPRGAAAAKEAPGKSAGGASGPAAASGPAGPAKQQQQQKKAEGGGGGGRPGA
QGVGGDGKTEQKPGEKKRGVKRPREDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDT
VVCLDTYNCDLHFKISRDRFSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPV
KHLYTKDIDIHEVRVGWSLNTSGMLLGEEEFSYGYSLKGIKTCNCETEDFGEKFDENDVI
GCFANFDGDEVELSYSKNGQELGVAFKISKEVLDGRPLFPHVLCHNCAVEFNFGQKEEPY
FPVPEEYTFIQKVPLEDRVRGPKGPEQKKDCEVVMMIGLPGAGKTTWVTKHAAANPGKYN
ILGTNTIMDKMMVAGFKRQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSA
AAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLPEVA
ECFDEIIYVELQKEEAQKLLEQYKEESKKALPPEKKQNTGSKKNKKSNKNQFNRGQRGRG
GFNMRGNFRGGVPGNRGGYNRRGGNMPQRGGGGGGGGGGSSGAIGYPYPRGPVFPSRGGY
SNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQWQQGQFWGQKPWSQHYHQGYY
NT seq 2523 nt   +upstreamnt  +downstreamnt
atgagctgctctcccgtgaacgtaaagaagctgaaggtgtcggagctgaaagaggagctg
aaaaagcggcgcctctccgacaagggcctcaaggctgagctcatggagcggctccaggcc
gcgctagatcaggaggaggccggcgggggcggccccgccagcggcgcggccgagcccggc
aacggcagcgtggagggggaggcggccgagagcggcgggggcgccgcgcagctccgccag
ggggggggccccggccaggccgcggcctccgccatggaggacgacgacgaggaagggctg
gaggccgccgatggcgacgccatggagttgggcgaggagaacggcgagcgggcaggggcc
gggggcggccccatggaggaggaggcgggcggcgaggaggaggaggaagaggaggaggat
gatgagaacggcgacgaccagggttttcaagagggggaggacgagttggccgacgaggag
gaggccgcggccggggacgccaacggccacggtgaccagcagccgccgcagccccagcag
ccgcagcagccccctccgctcctcccgccgcgcggcgccgctgccgccaaggaggctccc
ggcaagagcgctgggggcgcctcggggcccgccgctgcctctggcccggcgggccccgcc
aagcagcagcagcagcagaagaaagcggaaggcggcggcggaggcggccgccccggggcg
cagggcgtcgggggagatggtaaaacagagcaaaagcctggtgagaagaagaggggagtg
aagagaccacgtgaagaccatggccggggatactttgaatacattgaggaaaacaagtac
agcagggccaagtctcctcaaccacctgttgaagaagaagatgaacattttgatgacaca
gtggtttgtcttgatacttataactgtgacctgcattttaaaatctcaagagaccggttt
agtgcttcctctctgaccatggaaagctttgctttcctttgggctggagggagagcctct
tacggagtttctaaaggcaaagtctgctttgagatgaaggttacagaaaagattcctgtt
aaacacctgtatacaaaagacattgacatacatgaagtgcgagttggctggtcactgaac
acaagtggaatgttgcttggtgaagaagaattttcttacggttattctctaaaaggaata
aagacatgcaattgtgaaactgaagactttggtgagaagtttgatgaaaatgatgtgatt
ggatgttttgctaattttgatggtgatgaagtggaactctcatattccaagaatggacaa
gagcttggtgttgcattcaaaataagcaaggaagttcttgatgggcgaccactctttcca
catgttctctgccataactgtgcggttgagttcaacttcggtcagaaggaggagccctac
ttccctgtacctgaagagtacaccttcatccagaaggtccccctagaggatagggtccga
ggaccaaagggacccgagcaaaagaaagattgtgaagtggtgatgatgattggcttgcca
ggggctggcaagactacatgggttaccaaacatgcagcagcaaatcctggaaaatacaac
attcttgggacaaatactattatggacaaaatgatggttgcaggttttaagcgtcagatg
gcagacactggaaaacttaacacactgttgcagagggctccacagtgtcttggaaagttc
attgagattgcagctcgtaagaagcggaatttcattttggatcagacaaatgtgtctgca
gctgcgcagaggagaaaaatgtgcctgtttgcaggcttccagcgcaaagcagttgttgtt
tgcccaaaagatgaagactacaagcaaagaacacaaaagaaggcagaggtggagggaaaa
gatcttccagagcatgcagttctcaaaatgaaagggaacttcacactgccagaggtagca
gaatgttttgatgaaataatctatgtagagttgcaaaaagaagaagctcagaagcttttg
gaacagtataaagaagaaagtaagaaagctcttccgccagaaaagaaacagaacactggc
tcaaagaagaacaagaagagcaataaaaatcaatttaataggggtcagagaggacgtgga
ggattcaacatgcggggcaacttcagaggaggagtccctggcaatcgtggtggatacaac
aggaggggaggcaacatgcctcagcgaggtggtggaggtggcggtggtggtggtggcagc
agtggagcaattggctacccctatcctcgcggccctgtctttccaagcagaggtggctac
tccaacagaggaaactataacagaggtggaatgcccaacaggggaaactacaaccagaac
ttcagaggaaggggaaataatcgtggctacaaaaaccaatctcagggctacaaccagtgg
cagcagggtcaattctggggtcagaagccatggagtcagcattatcaccaaggatattat
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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