KEGG   Lonchura striata domestica (Bengalese finch): 110481872
Entry
110481872         CDS       T05897                                 
Symbol
RNF4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsr04121]
    110481872 (RNF4)
Enzymes [BR:lsr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110481872 (RNF4)
Ubiquitin system [BR:lsr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110481872 (RNF4)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_4 Prok-RING_4 zf-rbx1 zf-UDP zf-C3HC4_4 zf-RING_10 zf-RING_16 Rtf2 zf-RING_11 zf-RING_6 zf-P11 DZR TRAF3_RING Peptidase_C23 zf-ANAPC11
Other DBs
NCBI-GeneID: 110481872
NCBI-ProteinID: XP_021406362
Position
4:complement(62806025..62822316)
AA seq 194 aa
MSTTQRKRRGGTVNSRQARKRSRLMASTAEMASEAEPIELEESAGEEVVDLTCESSDPVV
VDLTHNDSIVIVEENQRQRRNLRLRSQRQADSCVLSSDDEDETRDNDVYVADKASRELGP
LEEETASSKPSGTVSCPICMDVYSEIVQSGRLIVSTKCGHVFCSQCLRDSLRNANSCPTC
RKKLTHRQYHPIYI
NT seq 585 nt   +upstreamnt  +downstreamnt
atgagcacaactcaacggaagcgccgtggaggaacagttaattctaggcaagctcgaaaa
agaagcaggctcatggcttctactgctgaaatggcttcagaagcagagccaatagaactt
gaagaaagtgctggtgaagaagtagtagatctcacatgcgaatcttctgatcctgtagtc
gttgatctaactcataatgattccattgtgattgttgaagagaaccaacgacaaaggaga
aatctgagactaagaagccaacgacaggcagacagctgtgtactgagtagtgatgatgaa
gatgaaacaagagataatgatgtgtatgtggctgataaagcatctcgagaactgggacca
ctggaagaggaaactgcaagttccaagccgtcgggtactgttagctgtccaatttgcatg
gatgtctactcagagattgtgcaaagtggacgactgattgtgtcaacaaaatgtggccat
gtcttctgcagtcagtgcctccgtgactcccttaggaatgccaactcttgcccaacctgc
aggaagaaactcactcacagacagtatcatcccatttatatatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (21)   
   Pfam (21)   
All databases (35)   

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