KEGG   Lonchura striata domestica (Bengalese finch): 110481921
Entry
110481921         CDS       T05897                                 
Name
(RefSeq) LOW QUALITY PROTEIN: proteasome subunit beta type-5
  KO
K02737  20S proteasome subunit beta 5 [EC:3.4.25.1]
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Pathway
lsr03050  Proteasome
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    110481921
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lsr01002]
    110481921
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:lsr03051]
    110481921
Enzymes [BR:lsr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.25  Threonine endopeptidases
    3.4.25.1  proteasome endopeptidase complex
     110481921
Peptidases and inhibitors [BR:lsr01002]
 Threonine peptidases
  Family T1: proteasome family
   110481921
Proteasome [BR:lsr03051]
 Eukaryotic proteasome
  Core particles (20S proteasome)
   beta type subunits
    110481921
SSDB
Motif
Pfam: Proteasome TctC
Other DBs
NCBI-GeneID: 110481921
NCBI-ProteinID: XP_021406466
Position
Unknown
AA seq 342 aa
MPSTKMAAAPFCLPALPSTKMATTPSSRPAHAPPPFRSVCALPSTKMAPRPLHRRHFVGA
HSPPPESKMALASVLRAELSEFSPNFPKSFPKRFLEDFAEDSEGIPEILRDPPGPPRVLA
APPWGLEAEPEGLGLHILHGTTTLAFKTPLGVTVAVDSRATAGSYIASQAVRKAAPLGGR
MLGTMAGGAADCAFWQRLVARQCRVQELRNKEPVSLAAASXXXANLVYQYKGLGLSMGTM
LCAWDKRGPGLYYVDSEGQRVAGAAFAVGSGASYAFGVLDRGLAEAPGSEAAACGLARRA
VYQAARRDAYSGGSVRVFHVGPQGWREVSHDDVADLQDIYGE
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgccctcaaccaaaatggcggcggcgcctttttgtcttcccgccttgccctcaaccaaa
atggcgacaacaccttcgagccgtcctgcgcatgcgccgccgccatttcgcagcgtttgc
gccttgccctcaacaaagatggcgccgcgccctcttcaccgccgccattttgtgggcgcc
cattccccccctcccgaatccaagatggcgctcgccagcgtcctccgtgcggagctctcg
gaattttccccgaatttccccaaaagtttccccaagagattcctggaggattttgccgag
gattccgaggggatccccgaaatcctgagggatcccccgggtcccccgcgggttttggcg
gctccgccgtgggggttggaggcggagccggaggggctcgggctgcacatccttcacggc
accacgactttggcttttaagaccccgctgggcgtgacggtggcggtggactcgcgcgcc
acggccggctcctacatcgcctcgcaggccgtgcgcaaggcggcgccgctgggcgggcgc
atgctgggcaccatggcgggcggcgccgccgactgcgccttctggcagcggctggtggcg
cggcagtgccgcgtgcaggagctgcgcaacaaggagcccgtgtcgctggccgccgcctcn
nnnnnnnnngccaacctcgtctaccagtacaaggggctggggctcagcatgggcaccatg
ctctgcgcctgggacaagcgcggccccgggctgtactacgtggacagcgaggggcagcgc
gtggccggcgccgccttcgccgtgggctcgggcgcctcctacgccttcggggtcctggac
cggggcctggccgaggcccccggcagcgaggcggccgcctgcggcctggcgcggcgcgcc
gtctaccaggcagcgcgcagggacgcctactcgggcggcagcgtgcgcgtgttccacgtg
gggccacaggggtggagggaggtgtcccacgacgacgtggccgacctgcaggacatctac
ggggagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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