KEGG   Lonchura striata domestica (Bengalese finch): 110484007
Entry
110484007         CDS       T05897                                 
Symbol
SEPSECS
Name
(RefSeq) O-phosphoseryl-tRNA(Sec) selenium transferase isoform X1
  KO
K03341  O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase [EC:2.9.1.2]
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Pathway
lsr00450  Selenocompound metabolism
lsr00970  Aminoacyl-tRNA biosynthesis
lsr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    110484007 (SEPSECS)
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    110484007 (SEPSECS)
Enzymes [BR:lsr01000]
 2. Transferases
  2.9  Transferring selenium-containing groups
   2.9.1  Selenotransferases
    2.9.1.2  O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase
     110484007 (SEPSECS)
SSDB
Motif
Pfam: SepSecS Beta_elim_lyase Pyridoxal_deC
Other DBs
NCBI-GeneID: 110484007
NCBI-ProteinID: XP_021409989
Position
4:53471430..53491787
AA seq 486 aa
MNAENQSRSERLVTAAYVRQGAQGRRAHELRLRALLEQGKCPEDGWDESTIELFLHELAI
MDSNNFLGNCGVGEREGRVASGLVARRHYRLIHGIGRSGDISAVQPKAAGSSLLNKLTNS
VILDIIKLAGVQTVTSCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI
TAGFEPVVIENALEGDELRTDLKEVEAKIKALGAENILCVHSTTSCFAPRVPDRLEELAV
ICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNE
SFIQEISKMYPGRASASPSLDVLITLLSLGTSGYKKLLKERKEMFSYLSSELKKLADNHN
ERLLDTPHNPISLAMSLKTLDETSDVAVTQLGSMLFTRQVSGARVVPCGSVQTVNNYTFK
GFMSHANDYPCAYLNAASAIGIKKQDVDVFLKRLDKCLKTFRKEAKQEKSINEISDANTA
TEQLED
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgaacgcggagaaccagagccgcagcgagcggctggtgacggcggcctacgtgcgccag
ggggcgcagggccgccgcgcgcacgagctgcggctgcgggcgctgctggagcaggggaaa
tgtcctgaagatggatgggatgaaagcaccattgaattgtttcttcatgaacttgctata
atggatagcaataacttcctgggcaactgtggcgttggtgagagggaaggaagagtggct
tcaggtcttgttgcccgaaggcattacaggttgatccatggaattggaaggtcaggtgat
atttctgcagtacagcctaaagctgcaggttcaagccttttgaacaaacttactaattca
gtaatactggatattataaaactggctggtgtccagacagtgaccagttgctttgtggtt
cctatggcaacaggcatgagtctaactttgtgttttttaacattgaggcacaagagacca
aaggcaaaatacattatctggccacgtatagaccagaaatcttgctttaaatcaatgata
actgcaggttttgagcctgtggtgatagaaaatgcattagaaggtgatgagctacggaca
gacctcaaagaagtggaggccaaaatcaaggctcttggtgctgaaaatattctttgtgtg
cattctacaacatcttgctttgctccaagggtacctgataggctggaggagctggctgta
atttgtgctaattatgacattccacatattgtcaacaatgcatatggagttcagtcttca
aaatgtatgcatcttatccagcagggtgctcgagttggcagaatagatgcttttgttcag
agcttggacaaaaatttcatggtgccagtaggtggtgctatcattgctggcttcaacgag
tccttcattcaggagatcagcaaaatgtatccaggaagagcatctgcgtccccttcttta
gatgtcctcattacacttctgtctctgggaaccagtggctacaaaaagttactgaaagag
agaaaggagatgttttcgtatctttcaagtgagctgaagaagctggcagataaccacaat
gagagactgttagatacaccacataaccccatttccttagccatgtcactgaagactcta
gatgaaactagtgatgttgctgttacccagcttggatctatgcttttcacaagacaagtt
tctggagcaagggttgttccctgtgggtctgtacaaactgtgaataactacacttttaaa
ggctttatgtcacatgcaaatgactatccttgtgcttacctcaatgctgcctcagcaatt
ggaattaaaaagcaagatgtagatgtattcctaaaaagacttgacaagtgtttgaagact
tttagaaaagaagcaaagcaagaaaaaagtataaatgaaataagtgatgctaacacagcc
acagaacaacttgaagactag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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