KEGG   Lactuca sativa (garden lettuce): 111877987
Entry
111877987         CDS       T05352                                 
Name
(RefSeq) serine hydroxymethyltransferase 6
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv00260  Glycine, serine and threonine metabolism
lsv00460  Cyanoamino acid metabolism
lsv00630  Glyoxylate and dicarboxylate metabolism
lsv00670  One carbon pool by folate
lsv01100  Metabolic pathways
lsv01110  Biosynthesis of secondary metabolites
lsv01200  Carbon metabolism
lsv01230  Biosynthesis of amino acids
lsv01240  Biosynthesis of cofactors
Module
lsv_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    111877987
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    111877987
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    111877987
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    111877987
Enzymes [BR:lsv01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     111877987
SSDB
Motif
Pfam: SHMT Aminotran_5 Beta_elim_lyase
Other DBs
NCBI-GeneID: 111877987
NCBI-ProteinID: XP_023730255
Position
5:248750127..248752770
AA seq 611 aa
MPRASRSNVSLGFLPHSSHHSQLSDGSISFQIDSSFNSSSRHLVSSIPLQLMEEQTTTES
NSVELNNQQQQRNVGSVDLNGESKIGGEEEEEKDVDNFQILGHPMCLKRRRDDNSSGATP
ESSSSSTSSKRCQTDQNGQERSLESRRQAVRAWGNQSLQAADPDIFDILEKEKQRQYKGI
ELIASENFVCKAVLEALGSHLTNKYSEGMPGARYYSGNQYIDEIEILCCQRALTAFGLES
ENWGVNVQPYSCTSANFAVYTGLLSPGDRIMGLDTPSGGHTSHGYYTPNGKKVSGASIFF
ESLSYKVNPQTGIIDFEKLEERALDFRPKILICGGSSYPRDWEYAKFRQIADKSGAVLMC
DMAQISGLIAAKECASPFDFCDIVTSTTHKSLRGPRGGIIFYRKGLKPGVRGKLLNQGDG
SYKYDFEEKINFAVCPALQGGPHNNHIAALAIALKQLATPDYKAYMQQVKKNAQALASAL
LKRNCKLVTGGTDNHLVLWDLRNLGLTGKNFEKVCEMCHITVNKIAIFDDNGSLTPGGVR
IGTPAMTTRGCLESDFETMAEFLYRAAQITSVMQQREHGKMGKAFVNKDIVELRSQVENF
ATQFAMPGQDM
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgcctcgtgcttctcgatccaacgtctcgttagggtttttgcctcattcttcccaccat
agccagctttccgacggctctatatcgtttcagatagattcgagtttcaatagctcttcg
cgccatctcgtttcatctatcccgcttcagttgatggaggaacagaccacgacagaaagc
aacagcgtcgaattgaacaatcaacaacagcagagaaacgtcgggagcgttgatttaaac
ggggagagcaaaattgggggcgaagaagaagaagaaaaagatgttgacaactttcaaatt
ttggggcatcccatgtgtttgaaaaggcgaagggatgataatagcagcggagctacccca
gagtcgtcttcttcatctacatcatcgaaacgttgtcaaaccgaccaaaacgggcaagag
agaagtctggaatcacgtcgacaagctgttcgagcttgggggaaccagtcccttcaggct
gctgatcctgatatctttgatatattggagaaagagaagcaaagacagtataagggtatc
gaattgatagcctcagagaacttcgtttgtaaagcagttttggaagccttagggagtcac
ctgacaaataagtattctgaaggaatgccaggcgctagatactatagtggcaaccaatac
attgacgagatcgaaattctttgttgccaacgtgccttgacagcattcgggcttgaaagt
gagaattggggtgtaaatgttcaaccatactcttgtacatctgcaaattttgcagtatat
actggtttgctatcccctggtgatcggatcatggggttagataccccttcaggagggcac
actagtcatggctactatacaccaaatggaaagaaagtatcaggggcttcaatcttcttt
gaaagcctttcatacaaagttaacccacaaacaggtattatagattttgaaaagcttgaa
gaaagggcacttgattttcgcccaaagatacttatttgtggtgggagctcatatcctagg
gattgggagtatgccaaatttagacagattgctgacaaatctggagcagtcttgatgtgc
gacatggctcaaatcagtggtctcattgctgccaaggaatgtgcaagcccatttgatttc
tgtgacattgtaacctcgactactcataaaagtcttcgtgggcctaggggagggattatt
ttctacaggaagggtcttaagccaggggtaagagggaagcttttgaatcaaggtgatgga
agctacaagtatgactttgaagagaagataaattttgctgtatgtcctgctcttcaaggt
gggccacataataatcatattgctgcccttgcaattgcactcaaacaattggctactcct
gattacaaggcatatatgcaacaagtgaagaaaaatgctcaggctttggcatctgcttta
ctaaaaagaaactgtaaactggttacaggaggaactgataatcatttggtactttgggat
cttagaaatcttggattgactggtaaaaactttgagaaagtatgtgaaatgtgtcacatt
actgtcaacaaaattgccatatttgatgataatgggagtctgaccccaggaggtgtgagg
attggtacacctgctatgacaacacgaggttgcttggagtctgattttgaaacaatggca
gagtttttgtatagagctgctcaaatcacaagtgttatgcagcagagggaacatggaaaa
atggggaaggcattcgtgaataaagacatagttgagttaaggtcccaagttgaaaacttt
gcaactcaatttgcaatgccagggcaagacatgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (9)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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