KEGG   Lactuca sativa (garden lettuce): 111880311
Entry
111880311         CDS       T05352                                 
Name
(RefSeq) VAMP-like protein YKT61
  KO
K08516  synaptobrevin homolog YKT6
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    111880311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111880311
Membrane trafficking [BR:lsv04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    111880311
SSDB
Motif
Pfam: Synaptobrevin Longin
Other DBs
NCBI-GeneID: 111880311
NCBI-ProteinID: XP_023732498
Position
7:69826467..69828122
AA seq 201 aa
MKITALLVLKCDARSDGSEPVILANATDVSHFGYFQRVTVKQFIVFVGRTVAKRTPPDQR
QSVQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSVLNKVIDEYQKCFGDSWRTIQADST
QPWPYLNEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLERGVKLDSLVEKSSDL
SAASQMFYKQAKKTNQCCTIL
NT seq 606 nt   +upstreamnt  +downstreamnt
atgaagatcaccgcgttactagtgttgaagtgcgacgcgagatccgacggatcggaaccc
gtgatactagcaaacgcgacagatgtgagtcattttgggtacttccagagagtcaccgtc
aagcagttcatcgtcttcgttggtcggaccgtcgccaaacgcacccctcccgatcaacgc
caatccgtccaacacgaagagtataaggtgcattcatacaacagaaatggtctatgtgcg
gtgggcttcatggatgatcactatcccgttagaagtgctttctctgtattgaataaggta
atagatgagtatcaaaagtgttttggtgattcatggaggacaatacaagctgatagcacc
caaccttggccttatctaaacgaagctttaaccaaatttcaggatcctgctgaggcagat
aagctgttgaaaattcagagggaattagatgaaaccaaaattatccttcataaaaccatt
gatagtgttcttgaaagaggggtaaaacttgacagtttagttgaaaagagttcagatctg
agtgcagcttcacagatgttctacaagcaagcaaagaagacaaatcaatgttgcacaata
ttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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