KEGG   Lactuca sativa (garden lettuce): 111880873
Entry
111880873         CDS       T05352                                 
Name
(RefSeq) ABC transporter F family member 3
  KO
K06158  ATP-binding cassette, subfamily F, member 3
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:lsv03012]
    111880873
Translation factors [BR:lsv03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    111880873
SSDB
Motif
Pfam: ABC_tran ABC_tran_Xtn AAA_21 SMC_N AAA AAA_15 AAA_29 AAA_22 DUF5906 NACHT AAA_16 RsgA_GTPase AAA_28 MMR_HSR1 ATP-synt_ab AAA_23
Other DBs
NCBI-GeneID: 111880873
NCBI-ProteinID: XP_023733051
Position
6:complement(12753039..12758933)
AA seq 714 aa
MTEVASNVVHEVLGPRAQDLDQPIIDYIINVLADEDFDFGFEGEGAFDAIGELLVDSGCV
TDFDECHSICSRLSEKFGNHGLIKIKPAVRSLATPFRMNEGMDEEKAPKRKPEPVDGPLL
TERDKIKLERRKRKDERQREVQYQMHVAEMEAAKAGMPVVSVNHDNTVEGPSVRDIHMEN
FNVSVGGRELIVDCTVTLSHGRHYGLVGRNGTGKTTFLRYMAMHAIEGIPKNCQILHVEQ
EVVGDNTSALQCVLNSDVERAQLLQEEARLLKIQRDAELEAEEKKDPNGLNVDDGMAQKL
EVIYKRLEFIDAYTAEARAASILAGLSFTPEMQNKPTKAFSGGWRMRIALARALFIEPDL
LLLDEPTNHLDLHAVLWLEAYLTKWPKTFIVVSHAREFLNTVVTDILYLQGQKLTAYKGD
YDTFERTRAELLKNKQKAFESNERSREHMQSFIDKFRYNAKRASLVQSRIKALERLGHVD
EVVNDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPILFRNLNFGIDLDSRVAMVGPNG
IGKSTILKLISGELQPISGTVFRSAKVRIAVFSQHHVDGLDLTSNPLLYMMRCFPGVPEQ
KLRGHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEA
LIQGLVLFQGGVLMVSHDEHLISGSVDQLWAVSDGRVTPFNGTFQDYKKKLQSS
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgactgaagtagctagcaacgttgttcacgaagtattaggtccaagagcacaggatcta
gaccagccaatcatcgattacataattaacgtcctcgcggatgaagattttgattttgga
tttgaaggcgaaggtgcctttgatgccattggagaacttctcgttgattccggctgcgtt
accgactttgatgaatgccactctatttgtagcagactgtctgagaaattcggaaatcat
ggtttgatcaaaataaaaccagcagttagaagccttgctacaccatttagaatgaacgaa
ggaatggatgaagagaaagctccaaaaaggaaacctgagccagtagatggtcctctgcta
actgaacgtgacaaaatcaagcttgaaaggaggaagaggaaagacgagcgtcaaagagag
gtgcaataccaaatgcatgtagcagaaatggaagcagcaaaggctggaatgcctgttgta
tcagtaaaccatgacaatactgttgaaggaccttcagttagagatattcatatggagaac
ttcaatgtctctgttggtggacgtgaacttattgttgattgtactgtaacgctttctcat
ggaagacactatgggcttgttggtagaaatggaacaggaaaaacaactttcttaaggtat
atggctatgcatgccattgaaggtattcctaaaaactgtcagatattgcatgtggagcag
gaagttgttggtgataacacgtcagcattgcaatgtgttcttaattctgatgttgagaga
gcacagctgttgcaagaagaagcccgtttgctaaaaatacagagagatgctgaattggag
gctgaagaaaagaaggatccgaatgggttaaatgtagacgatggaatggctcagaagctt
gaagtgatatacaaaaggctggagttcattgatgcatatactgcggaagcccgtgctgct
tctattcttgcgggtctgagttttacaccagaaatgcagaataagccaacaaaagctttt
tctggaggatggaggatgagaattgctcttgctcgcgcacttttcattgagcctgatttg
ttactacttgatgaacctacaaatcatcttgatcttcatgcagtattgtggttggaagct
tacctaacaaaatggccaaaaacatttattgttgtttctcatgctagggaattcttgaac
acggtagttacagatatattgtatcttcaagggcaaaaactgactgcatacaaaggagac
tatgatacattcgagaggacacgagctgaacttcttaaaaacaaacagaaagcctttgaa
tcaaatgagcgttcaagggaacatatgcagtctttcattgataaatttcgttacaatgcg
aaacgtgcatctctggttcaatctagaatcaaggcactggaacgtttaggacacgttgat
gaagtggtgaatgatcctgattacaagtttgagtttcctacaccagatgatagacctggc
ccacctattataagtttcagtgatgcttcatttgggtatcctggaggcccaatactgttc
aggaatttgaattttggaatagatttggacagccgtgtagcaatggtggggcccaatggt
attggtaagtctaccatacttaagttgatttcaggagagcttcaaccaatctcaggaaca
gtttttcgttcggctaaggttcgtattgctgtgttcagtcagcatcacgttgatgggctt
gaccttacctccaatcctcttctatacatgatgcgttgcttccctggagtgcctgaacaa
aagcttcgaggccacttgggttcttttggtgttactgggaatctagctcttcaaccaatg
tacaccttgtctggtggtcagaaaagcagagttgcatttgcaaaaataacatttaaaaag
cctcacatcattttacttgatgagccgtcaaatcatcttgatttggatgctgtggaagca
ttaatacaaggtcttgttctattccaaggaggggttctcatggtgagtcacgacgagcat
ctgatttcgggcagcgttgaccagttatgggcagtgtcggatggcagggtgacacctttc
aatggcaccttccaagattacaagaagaaactacaatcttcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (16)   
   Pfam (16)   
All databases (27)   

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