KEGG   Lactuca sativa (garden lettuce): 111883590Help
Entry
111883590         CDS       T05352                                 

Definition
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37e
  KO
K03283  heat shock 70kDa protein 1/2/6/8
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03040  Spliceosome
lsv04141  Protein processing in endoplasmic reticulum
lsv04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111883590
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111883590
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111883590
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lsv01009]
    111883590
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lsv03041]
    111883590
   03009 Ribosome biogenesis [BR:lsv03009]
    111883590
   03110 Chaperones and folding catalysts [BR:lsv03110]
    111883590
   04131 Membrane trafficking [BR:lsv04131]
    111883590
   03051 Proteasome [BR:lsv03051]
    111883590
   03029 Mitochondrial biogenesis [BR:lsv03029]
    111883590
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsv04147]
    111883590
Protein phosphatases and associated proteins [BR:lsv01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     111883590
Spliceosome [BR:lsv03041]
 Complex B
  Other components
   Prp19 complex
    111883590
 Complex C
   Prp19-CDC5 complex
    111883590
Ribosome biogenesis [BR:lsv03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    111883590
Chaperones and folding catalysts [BR:lsv03110]
 Heat shock proteins
  HSP70 / DNAK
   111883590
Membrane trafficking [BR:lsv04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    111883590
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    111883590
Proteasome [BR:lsv03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    111883590
Mitochondrial biogenesis [BR:lsv03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    111883590
Exosome [BR:lsv04147]
 Exosomal proteins
  Proteins found in most exosomes
   111883590
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HSP70 DUF4268
Motif
Other DBs
NCBI-GeneID: 111883590
NCBI-ProteinID: XP_023735688
Position
Unknown
AA seq 128 aa AA seqDB search
MEGGRRRLFVSKLTSGTGQKNNITITNDKGRPSKDKIEKMVQEAGKYESRDEEPKKKLEV
KNALVNYTYNMRNTAKDEKLGEKLTPVDKKIEDAIDEVIVWLYTNQLAEGDEFKDKMKEL
FPILKLLG
NT seq 387 nt NT seq  +upstreamnt  +downstreamnt
atggaagggggacggcggcggcttttcgtgtccaaacttacatctggtacagggcaaaag
aacaatattacaattactaatgacaagggaagaccttcaaaggataagattgagaagatg
gttcaggaagctgggaagtatgagtctagagatgaggagcccaagaagaagttggaggtg
aagaatgctttagtgaattatacgtataacatgaggaacacagcgaaagatgagaagctt
ggtgagaagttgactccggttgataagaagattgaggatgcgattgatgaggtgattgtg
tggttatatacaaatcagttggctgagggggatgagtttaaggataagatgaaggagctt
tttcccattttgaaacttttaggttag

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