KEGG   Lactuca sativa (garden lettuce): 111887166
Entry
111887166         CDS       T05352                                 
Name
(RefSeq) uncharacterized protein LOC111887166
  KO
K03267  peptide chain release factor subunit 3
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111887166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsv03019]
    111887166
   03012 Translation factors [BR:lsv03012]
    111887166
Messenger RNA biogenesis [BR:lsv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     111887166
Translation factors [BR:lsv03012]
 Eukaryotic type
  Release factors
   111887166
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 G-alpha
Other DBs
NCBI-GeneID: 111887166
NCBI-ProteinID: XP_052624262
Position
2:45455918..45464650
AA seq 519 aa
MDNIEEDIRALQLDSSGEDSNMVTNENGGEHQESIALDKLEEDLRNESQTDSHMEEDANP
HTGHSDPQAAIAVKEQATSAPEPVDDEKNKKRHLNVVFIGHVDAGKSTIGGQILYLSGQV
DERTIQKYEKEAKDKSRESWYMAYIMDTNEEERAKGKTVEVGRAHFETETTRFTILDAPG
HKSYVPNMIMGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNK
MDDPTVNWSKERYDEIESKMVPFLKSSGYNVKKDIQFLPISGLFGTNMQTRMDKKICPWF
NGQCLFEALDVIEVPLRDPTAPFRMPIIDKFKDMGTVVMGKVESGSIREGNNLLIMPNKV
QVKVLALFMDEDRVRSAGPGENLRVRVSGIEEEDILSGFVLCSIEKPIPVVHEFIAQLQI
LELLENAIFTAGYKAILHIHSVVEECEIIELMHQLDPKTRKPMKKKVLFVKNGAAVICRI
QVTNMICIEKFTDFQQLGRFTLRSEGKTVAIGKVTDLRA
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggataatatcgaggaggacattcgcgctttgcaactggactcatctggtgaagatagc
aacatggtgactaatgagaatggtggggagcatcaagaatccatagctctggataaattg
gaagaagatttgaggaatgagtcacaaaccgactcccacatggaggaggatgctaacccc
cacacagggcattctgatccacaagctgccattgcagtgaaagagcaagcaacttctgct
ccagaacctgttgatgatgagaagaataagaagagacacttaaatgtggtattcatcggt
catgttgatgctggaaaatctaccattggaggccagatactttacctcagtggccaagtt
gatgagcgtacaattcaaaaatatgagaaagaagccaaggataagagtagagagagctgg
tacatggcatacattatggataccaatgaagaggagagagcaaaggggaaaacagttgaa
gttggacgtgcacattttgagacagaaactacacgtttcaccatattggatgcacctggg
cataaaagttatgtacctaacatgattatgggtgcttctcaagctgatataggagtactg
gtcatatctgctcgaaagggagaatttgaaactggatatgagagaggtggacaaactcgt
gaacatgttcaacttgcaaagactttgggtgtcactaagctcttggttgttgtcaataaa
atggatgatccaactgttaactggtcaaaagagaggtatgatgaaattgaatcgaaaatg
gttcctttcttgaaatcttcaggatacaatgttaaaaaagatattcagtttcttccaata
tctggtctttttggaactaatatgcaaacaagaatggacaagaaaatatgcccttggttc
aatggtcaatgtctctttgaagctcttgatgttattgaagttcctcttcgtgatccaact
gctccatttagaatgcctattattgacaagtttaaggacatgggaactgttgttatggga
aaagttgaatctggtagcatacgtgaaggcaataatcttctcataatgccaaacaaggtt
caagtgaaagttcttgctctatttatggatgaggatagagtgaggagtgcgggccccggt
gagaatctacgtgtcagagtatctgggattgaagaagaagacatactttcaggctttgtt
ctttgcagtattgaaaaaccaataccagtggttcatgagttcatagctcagttgcaaatt
cttgagttgttggaaaatgctattttcactgctggatacaaagctatattgcatattcac
tctgttgttgaggaatgtgagatcattgagttgatgcatcaacttgatcctaaaaccaga
aaaccaatgaaaaagaaggtgctttttgtcaagaatggtgctgctgtcatatgccgtatt
caggtgactaatatgatatgcatcgagaaattcacagactttcaacaacttggtcgattt
acactccgctctgaaggaaaaacagttgcaattggaaaagttacagatcttcgtgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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