KEGG T05352: 111891718

Lactuca sativa (garden lettuce): 111891718

Entry

111891718         CDS       T05352

Name

(RefSeq) paired amphipathic helix protein Sin3-like 2

K11644

paired amphipathic helix protein Sin3a

Organism

lsv Lactuca sativa (garden lettuce)

Brite

KEGG Orthology (KO) [BR:lsv00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lsv03036]
    111891718
Chromosome and associated proteins [BR:lsv03036]
Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     111891718
    REST complex
     111891718
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111891718

SSDB

Motif

Pfam:

PAH Sin3a_C Sin3_corepress

Other DBs

NCBI-GeneID:

111891718

NCBI-ProteinID:

XP_023743557

Position

4:400381563..400388936

AA seq 1245 aa
MKRLRDDVFSNNSQFKRPFVSPRGEPPYGQPHVPGDEGVGEGGGGAGAGGGGGGGGGGGG
GGAGGGSSAQKLTTNDALTYLKEVKDMFHDQREKYDMFLDVMKDFKAQRIDTTGVIARVK
ELFKGHNNLIFGFNTFLPKGYEITVIEEDEPPPKRTVEFEEAISFVNKIKNRFQNDDRVY
KSFLEILNMYRREHKGIKEVYHEVASLFEDQRDLLDEFTRFLPDASAHHASHGRHSYNRY
DERSSAMNPLKQTQLDKQRNRRDRGIASHADRDLENRDIDEDDKTTMKLQKDQRKRSENQ
NRRNSDQDYKETDLDAKNKDMNRLEKRKSEDFGVHSGSAPYGDKDALKNMYSAEFSFCEK
VKDRLRNHDDYQAFLKCLHIYTTDIITRKELQSLVSDLLGKHPDLMEGFRTFLGGNIDGF
LAGVMDKKSLWNEGHGSKSTRTDEKERDHNNAAKEDKYKEKYWAKSIQELDLSDCQRCTP
SYRLLPDDYPIPSVSQRSELGTQVLNDLWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDR
FELDMLLESVSSTAKRVEELLNSINNKTITPETPIRIEDYFTALNLRCMERLYGDHGLDA
METLRRNPSASLPVMLNRLKQKQDEWTKCKSDFNKVWAEIYAKNHYKSLDHRSFYFKQQD
SKNLSIKSLVSEIKEIKGKSQTDEDILLSIAAGNRHSIMPNLEFEYSDNDIHEDAFKLIK
YSCQEICTTKEQSNKVLNLWTTFLEAMLGVQSRDESSVSDSGKGILVNGDTTLVKEDGLQ
VQPEKEGGREATTRPSNATENGHEAKSNIHEAPVSQKLQPMDSRCIAMGNGNPGESSKVE
KEEGELSPNHDSDDLNFSTYQDNNDNGTHKGELEADGDDDDNEDVSGGGDDISGDESGGS
REEEEEDDEEEEECKPESEGEGNGIEDSVDLLPPSEHFLRTVKPLAKCVASSSSSCGGEK
KDSRVFYGNDAFYTLFRLHQVLYDRLLSAKLNSTSAEAKRKTTKDSSSSDLYSIFMTSLY
KLLDGVADNAKFEDDCRAIFGNQSYILFTLDKLIYKIVKQLQSVVGDEIDNKLLQLYEYE
KSRKPEKFIDSVYYENAHVVLHDENIYRFQCSSWPSRLTIQLMDDGIEKPEVVPVSVDSN
FAAYLHKDFLSAVNAKKQSGIMLKRNKRRFMEMDESCALSVAMEGAHVVNGLEYKMSCCS
SKISYVLDTEDDFFRERRKSQSCGNKSQTNVERFHRFLAASLAKE

NT seq 3738 nt +upstreamnt +downstreamnt
atgaaacgattgcgcgatgatgtatttagtaacaactctcaattcaagcggccatttgtt
tctcctcgaggggaaccaccatatggtcaacctcatgtccctggagatgaaggagtaggg
gagggagggggaggggcaggtgcaggaggaggaggtggcggtggtggtggtggcggtggg
ggtggggcaggaggtggtagtagtgcacaaaaactcaccaccaatgatgcattaacatat
ctaaaagaagttaaagacatgttccatgatcaaagagaaaaatatgacatgtttcttgat
gtaatgaaagatttcaaagctcaaagaattgatactactggtgttatcgcaagggtcaaa
gaattatttaaaggtcacaataatttaatttttgggttcaacacttttttgcccaaagga
tatgaaattactgtaattgaagaggacgagcctccaccaaaaagaacagtagagtttgaa
gaggctataagctttgtaaacaaaataaagaatcgtttccaaaacgatgatcgtgtttac
aagtcatttttggaaatcttgaacatgtatcgaagagaacacaagggcatcaaagaagtc
taccatgaggttgcttcactttttgaagatcaacgcgatcttcttgatgaattcacaaga
tttttaccagatgcttctgcacatcatgcttcacatggtagacattcttataaccgttat
gatgaacgaagctcagctatgaatccactcaaacaaacacaattagacaagcaacgaaac
cggagagataggggaattgcttcacatgctgatagggatcttgaaaaccgtgatattgat
gaagatgataaaacaacaatgaaacttcaaaaagatcaaagaaagagatctgagaatcag
aataggagaaattctgatcaagattataaagaaactgatcttgatgctaaaaacaaggac
atgaatcgccttgaaaaaagaaaatctgaagattttggagtccattcaggttctgctcca
tatggtgataaagatgccctaaaaaatatgtacagtgcagaatttagtttctgtgagaaa
gtgaaggataggttacgtaatcatgatgattatcaagcattcttgaagtgtcttcatatc
tacaccactgatataattacaagaaaggaattgcaaagcttggtttctgatctacttgga
aagcacccggatcttatggaagggtttagaacatttttggggggaaatatagatggattt
ctcgccggtgttatggacaaaaaatctttatggaatgaagggcatggatcgaaatcaact
aggacagatgagaaagagagggatcataataatgctgcaaaagaggacaaatacaaagag
aaatattgggcaaaatctattcaagaacttgacttatctgattgtcaacgttgtactcct
agttacagacttcttcctgatgattatccaatcccatcagttagtcaaagatcagaactt
ggtactcaagtgttaaatgatttatgggtgtctgtgacttctggtagtgaggattattct
tttaaacatatgcggagaaaccaatatgaagagagcctcttcagatgtgaggatgacagg
tttgaactagatatgttgttggaatctgtaagttcaactgcaaaacgtgttgaggaatta
ttgaacagcattaacaacaagacaatcactccagaaactcccatccgtatagaagactac
ttcactgctctgaatttgagatgcatggagagattatatggtgatcatggtcttgatgcc
atggaaacacttagaagaaatccatcagcttcattgcctgttatgttaaatcgcctcaaa
cagaaacaagatgagtggacaaaatgtaaatcagattttaataaagtttgggctgaaatt
tatgcaaaaaatcattacaaatcactcgatcaccgaagcttctacttcaagcaacaagat
tccaagaatctcagcataaaatcattggtgagtgagattaaggaaataaagggaaagagt
cagacggatgaagatattcttctttccattgctgctggaaaccgacattccatcatgcca
aatcttgaatttgaatattctgataatgatattcatgaagatgcattcaaacttattaaa
tattcatgtcaagagatttgcacaacgaaagaacaatccaacaaagttttgaatctttgg
acaactttcttggaagcaatgcttggtgtccaatcacgggatgaatccagtgtgtcagat
tcaggaaagggtattttggtaaatggagatactactttagtaaaggaagatgggctgcaa
gttcaaccagagaaagagggtgggcgtgaggcgactactagaccaagtaatgctactgaa
aatggtcatgaagcaaagtcaaatattcatgaggctcctgtctcacagaaattacagccc
atggatagtagatgtatagcaatgggaaatggaaatcctggtgagtcatcaaaagtggag
aaagaagagggggaattatcacccaatcatgattctgatgacctcaatttttcaacctat
caagacaataatgacaacgggacacataaaggggaattggaagcagatggtgatgatgat
gacaatgaagatgtttccggtggtggtgatgacatttccggtgatgaatccggtggttcc
agggaggaggaggaggaggatgacgaggaggaggaggaatgtaaaccggaaagtgaagga
gaagggaatggaattgaggattccgtggatttattacctccatctgagcattttttacgg
accgttaagcccctggcgaaatgtgttgcttcttcttcttcttcatgtggtggtgaaaaa
aaagattcccgtgttttttacgggaatgatgcattttatacgctttttagacttcaccaa
gtattatacgacagacttttatctgcaaagctcaattcaacatcagctgaagcaaaacga
aaaaccacaaaagattcttcctcttctgatctttactccatatttatgacctctctttac
aaattacttgatggtgttgctgacaatgcaaaattcgaagacgattgtcgtgccattttt
ggaaatcaatcatatattttattcacattggataaattaatttacaaaatcgtcaaacag
cttcaaagtgttgtaggtgacgagatcgataataaacttctacaattatacgaatacgaa
aaatctcgaaaacccgagaaatttattgattcggtatattacgaaaacgcccatgtcgtt
cttcatgatgagaatatttacagatttcaatgttcatcttggccttctcgtttgactatt
caactaatggatgatgggattgaaaaaccagaagtggttccagtttctgtagattctaat
tttgcagcttatcttcataaagattttctttctgctgttaatgcaaaaaaacaatcgggc
attatgttgaaaagaaataaaaggcgattcatggagatggatgaatcttgtgctttatcg
gttgccatggaaggtgctcatgtggtgaatggtttggagtataagatgtcttgttgctca
tcaaagatatcgtatgttctggatacagaagatgacttttttcgagaaagacgaaaaagt
caatcatgtgggaataaaagtcaaacaaatgtagaaaggtttcacagattcttagcagcc
tcactagcaaaagaatag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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