KEGG   Lactuca sativa (garden lettuce): 111892938
Entry
111892938         CDS       T05352                                 
Name
(RefSeq) uncharacterized protein LOC111892938
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    111892938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lsv03009]
    111892938
Ribosome biogenesis [BR:lsv03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    111892938
SSDB
Motif
Pfam: GTP_EFTU EFG_C EFG_III GTP_EFTU_D2 SRPRB EFG_IV
Other DBs
NCBI-GeneID: 111892938
NCBI-ProteinID: XP_023744779
Position
8:complement(34108282..34111731)
AA seq 1013 aa
MDDSYDCRNIRNICILAHVDHGKTTLADHLIASSGGGVLHPKQAGRLRFMDYLDEEQRRA
ITMKSSSIGLQYKGYAINLIDSPGHMDFCSEVSTASRLSDGGLVLVDAVEGVHIQTHAVL
RQAWIEKLTPCLVLNKIDRLIVELKLSPLEAYNRLQRIVHEVNSIVSTYKSEKYLSDVDS
ILAGPAGEVSDENQEFIEDDEEDAFQPQKGNVVFACALDGWGFSICEFAEFYASKLGASS
SILQKALWGPRYFIPKTKMIVGKKGLSSGSKARPMFVQFVLEPLWQVYEAALDTNGDKGI
LEKLIKSFHLSIPPRELQHKDPKYVLQSVMSRWLPLADAILSMVVKHMPDPIAAQSFRVS
RLLPKREILDYSIGDSEVVAEAELVRKSVEACDSQPDSPCVAFVSKMFAVPMKMLPQRDV
NGDLLSNYTEESGSGDSDECFLAFARIFSGVLHSGQKVFVLSALYDPLKGADSMQKHIQE
AELHSLYLMMGQGLIPVASARAGNVIAIRGLGQHILKSATLSSTKNCWPFSSMTFQVSPT
LKVAIEPSDPADMAALMKGLRLLNRADPFVEVSVSARGEHVLAAAGEVHLERCIKDLKER
FAKVNLEISPPLVSFRETIERESLNPFEKLKSLSVSSNFIERATPNGRCTVRVHILKLPD
ALTKLLDESSDLLEAIIAGKAIQVKTMGGQDDDHPVEALRKRIWDAIESEVSDENAEKNK
TLWENLLKRIWALGPRQVGPNMLLLPDSTTKETGSSVLIRSSPYVSERLGFTEASNFDEV
EIENQSLIEEAKSLRSSVLSGFQVATAAGPLCDEPMWGLAFMIEASILPFESETEAIHQQ
SQSDQYGVFSGQVMTAVKEACKAALLQKNPRIVEGMYFCELNTPTEYLGPMYAVLARRRA
RILKEEMQEGSPLFTVHAYVPVAESFGFADELRRWTSGASSALLVLSHWEAVPEDPFFVP
KTEEEKEEFGDGSSVLQNTARKLIDGVRRRKGLPVEEKVVQYATKQRTLARKV
NT seq 3042 nt   +upstreamnt  +downstreamnt
atggatgattcttatgattgtcggaacatccggaatatatgcattcttgctcatgttgat
catggaaagactactcttgctgatcacctgattgcctcgtctggaggtggggttctccat
cccaaacaagctggtcgccttcggtttatggattatctagacgaagaacaaaggcgcgcg
ataacgatgaagagctcctcaattggtcttcaatacaaaggttatgcgataaaccttatt
gattcgcctggccatatggacttttgtagtgaggtttctactgcttcacgtttgagcgat
ggcggtttggttttggtagatgctgttgaaggagttcacattcagacacatgctgttttg
cgccaggcatggatcgaaaaacttacaccctgtttggttttgaataagattgatagattg
attgttgagctgaagttgagtcccttggaggcttataatcgtctccaaagaatcgttcat
gaagttaacagcatagttagtacttacaaatctgaaaagtacttatcagatgtcgattca
attcttgctggccctgctggtgaggtaagtgatgaaaatcaggagttcatagaggatgat
gaagaagacgcgtttcaacctcaaaagggaaatgttgtgtttgcttgtgcattggatggg
tgggggtttagcatttgtgaattcgcagagttttatgcttctaaactcggtgctagttct
tccattttgcaaaaggcgttatggggtcctagatacttcattccaaaaacaaagatgatt
gtgggtaagaagggactgtcttctggaagtaaagctcgccctatgtttgtgcagtttgtg
ctcgagccactatggcaagtctatgaagcagccttggatacaaatggggataaagggata
cttgagaagctaatcaaatcgtttcatttatctatacctcctcgtgaactgcagcacaaa
gatcctaaatatgtccttcaatctgtaatgagcaggtggcttcctttggctgatgctatt
ttatcaatggtggttaaacatatgccagaccccattgctgcacagtcctttcgcgtctcc
cgcctcctccctaaaagagaaatcttggattattctattggtgattctgaagtggttgca
gaggctgaactcgtgaggaaatcagttgaggcttgcgattcacaacctgattctccttgt
gtagcttttgtatctaaaatgtttgcagttcctatgaagatgttacctcagagagacgta
aatggtgatctcttgagtaattatacagaagaaagtggaagtggagactctgatgagtgc
ttcctggcatttgccaggatctttagtggggttcttcattcaggtcagaaggttttcgtg
ctatcagctttgtatgatccacttaaaggtgcagattcaatgcagaagcatattcaagaa
gctgagttgcattcactgtatctgatgatgggtcaaggcttaataccagtggcatctgct
agagcagggaatgtgattgccattagaggattaggtcaacatatattaaaaagtgctact
ctttcatcaacaaagaactgttggcctttttcaagtatgacattccaggtttcacctact
ctaaaagttgcaatcgagccttctgatcctgctgacatggctgcacttatgaaagggctt
aggcttttaaaccgagcagacccttttgtagaggtgagtgtgtctgctagaggggaacat
gtccttgctgctgcaggtgaagttcatcttgaaagatgcattaaagatttgaaagagagg
ttcgcaaaggtaaatcttgaaatttcacctcctcttgtgtcttttagagaaaccattgaa
agggaatctttaaacccttttgagaaactaaaatctttaagtgtgagttctaattttatc
gaaagagccacaccaaatgggaggtgtacagttcgtgtccatattttgaaacttccggat
gcacttactaagttactggacgaaagttcagaccttctagaagctatcatagcaggtaaa
gcaatacaggtgaaaacaatgggaggtcaagatgatgatcatccagttgaagcacttagg
aaacgcatttgggatgcaatagagagtgaagtttcagatgagaatgctgaaaagaataaa
actttatgggagaatcttttaaaaagaatctgggcattaggtccgagacaagtgggtccc
aacatgctgcttcttccagattcaaccacaaaagaaacaggttcttctgttctgataaga
agctctccttatgtatctgaaagattaggcttcacagaggcttctaattttgatgaagtt
gaaatcgagaaccaatcactgattgaggaagcaaagagtctgagaagcagtgtgttatcc
gggttccaagtagccactgcagcgggcccactgtgtgatgaaccaatgtggggcttagca
ttcatgatagaagcttcaattctcccatttgaaagtgaaaccgaagccattcatcagcaa
tctcaatcagatcaatacggggtgttttcagggcaagttatgactgctgtaaaagaagct
tgtaaagcagctttacttcagaaaaaccctagaatcgttgaagggatgtatttctgtgaa
ttaaacacaccaacagagtatttaggacctatgtatgctgttcttgcacgtaggcgtgct
agaatcttgaaggaggaaatgcaggaaggatctccattgtttacagttcatgcttatgtt
ccagttgcagagagttttggttttgctgatgagttgagaagatggacttctggtgcttcg
agtgctcttcttgttcttagtcattgggaagcagttcctgaagatcccttttttgtaccc
aaaacagaagaagaaaaagaagaatttggagatgggtcaagtgttttacagaatacagca
agaaagttgattgatggtgttaggaggcgtaaggggttacctgttgaggaaaaagttgtt
caatatgctacaaaacagagaactttggctcgtaaagtttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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