KEGG   Lactuca sativa (garden lettuce): 111896742
Entry
111896742         CDS       T05352                                 
Name
(RefSeq) uncharacterized protein LOC111896742 isoform X1
  KO
K19027  zinc finger FYVE domain-containing protein 26
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111896742
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     111896742
SSDB
Motif
Pfam: TPR_2
Other DBs
NCBI-GeneID: 111896742
NCBI-ProteinID: XP_023748496
Position
3:39069869..39081163
AA seq 2548 aa
MESPPQQAVMEMETDLLSRLTANHLFLGQIEPFRATILALRSRNPDLARAILQTIVASGG
RYETILFSSNSSPALLTYLCTLELLQFNDPTSRVWSFDSATLRLRAEFLLYVQTITSRVL
ETKKVIDNLGQNEMDIANLDSIKRDGTGTSERLEESRWGASGTSIRDIDSKQQFSGSKGD
TSEMDINDFDSRTGHLADQDVASAKHWDFQECLRVLNKISEVGFKRLRPDLIELDVKESE
EEGTSGATLEIEEGEMVCLRGVILENAVIFQALCENISKQVKWVQGNDGGDDSGLAISPT
LQEEDVKSLELIQSYAQMVHLSAMKECLKEGNNDGAMSHIQFLHFDYGVEEADYRMVLQD
LLKRGLSGMTAYDDTWLSMRSKLLSIYEKALSSKSIRLVNMIQSIQEELLSEEIETHKVL
NGNQIPPPLARLLSFIAQMTPDPSGDQTSSFKSAISACMRDMYHYARISGLHVLECVMDV
ALSAVKREQLQEASNILSLYPQLQPLVAVMGWDLLPGKTDMRRKLMQLLWTSKSQILRLE
ESSLYGNKSDEVSCVEHLCDFLCYQLDLASFVACVNSGQSWSLKSSLLLSGKGNTTEFEN
QELQLDPFVENLVLERLSIHSPLRVLFDVVPDIRFQDAIELFSMQPITSNLAAWKRMKDV
ELMHMRYAMESAVLALRAMGNSKNNEVKSYQMALCYLKDLRIHLEAVTNIPRKIMMVNII
ISLLHLDDLSRDSSPSPPPRTHPDTSSTSEESGDQCTNEEGNTMVVSFTGGLLNILRQNL
PSGVTEQEIAIDGNVPTDGRQALEWRISKARSFIEDWEWRLSILQSLLPLSDRQWKWEEA
STVLRAAPSKLLNLCMQRAKYDIGEEAVNRFSLTPEDKATLELAEWVDGAFKRASAADAV
SRAADETSVVQDLDFSTLRSQLGPLVATLLCIDVATASSKSSALSQKLLDQAQVMLSEIY
PGRAPKMGATYWDQIYEIGIISVVKRLLKRLQELLEQEKFPVLQALLTGDLISTKNFQRQ
GPRERALAMLHQMIQDAHMGKRQFLSGKLHNLARAIADEEYEREFMRAESTYPDEKDGVV
GLGLRPMRQQSSVEKSTASKEAEKRIYGPLTSKATTYLSQFILHIAAIGDIVDGTDTTHD
FNYFSLIYEWPKDLLTRLVFDRGSTDAAAKVAEIMSADFVHEVISACVPPIYPPRSGHGW
ADIAVIPTCPKSSSEGKLLSPSSKEAKPSSYCPSSATPGVPLYPLQLDVVKHLVKLSPVR
AVLACVFGNCILYGGNDYSSTMSGSLTDGPGSVQKHDADRLFFEFALDQSERFPTLNRWI
QMQTNLHRVSEVAVTAEHSVNDGIEVKTSVKRFREHDSDSDLEHDELAAVGTSSLSVLTD
TTNESGIWQDSPKSEAAEIDTTVFLSFGWENEKPYEKAVERLIEEGKLMDALALSDRCLR
DGASDHLLKLLIEREEENHTVFNASSHSNFRIPSNSWQYCRRLKDKQLAAKLALKYLHRW
ELDAALDVLTMCHCHLLETDPSKNEVVLRRQALMRYSHILSADERYNSWQEVEAECKEDP
EGLALRLAEKGAVSAALEVAESAGLSIDLRRELQGRQLVKLLTADPITGGGPAEASRFLS
SLRDSEDALRVAMGAMQQLPNLRSKQLLVHFFLKRKDSNLNEPELSRLNLWALGLRVLAI
LPLPWQQRCSALHEHPQLILEVLLMRKQLHSASLILKEFPSLRDNNKIFRYAAKAIAVTI
APPRRETRIQVSGPKAKQKAGGTPTKSSFSNSLSNLQKEARRAFSWNPRNSAEKTAPKDV
QRKRKGSGLTQTERATWEAMAGIQEDRVSSYTMDGGQDRLPSVSIAEQWMLTGDPNKDEA
VRSSHHYESAPDIILFKELLSLCSDESTSAKGALDLCVNQMRAVLSSETLPENASMETIG
RAYHATETFLQGLLYAKSQLRKLSVGNDFSVLSKDMEDTSSDAGSSSMGSQAPDELSETL
SHSDTWLRRAELLQSLLGYGIAASLDDIADEESSGRLRDRLILEERYSMAVYTCKKCKID
AFAVWNAWGLALIRMEHYAQARVKFKQALQLYKGDPAPVIQDIINTIEGGPPADVSSVRS
MYDHLAKSAPAILDDSLSADSYLNVLYMPSTFPRSERSRRLQEASNENSVNSSEFEDDVP
RSNLDSIRYLECVNYLQEFTREDLLEFMFRHGHYKDACMLFFPENSVPTPPQVSSTPQKP
DPLSTDYGSIDDLCDLCVGYGAMSVLEEVMASRMSSETADVAVKQYTGAALSRICVFCET
HKHFNYLYRFQVIGNDHVAAGLCCIQLFVNSSALDEAIKHLENAKMHFDEALSERYKSGG
STKLVSKGVRAQKLTAEGLIKFSARVSMQVDVVKSFNDTDGPQWKYSLFGNPNDAETFRR
RCEIAETLVEKNFDLAFQVIYEFKLSAVDIYAGVASSLADRKKGGQLTEFFRNIKGTIED
DDWDQVLGAAINVYANKHKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIASRSGSVAD
VQYVAHQALHANALPVLDMCKQWLSQYM
NT seq 7647 nt   +upstreamnt  +downstreamnt
atggaatctccaccgcaacaggcagtgatggaaatggaaacagacctgctttctcgtctc
acagcaaaccatttgttcttgggtcaaatcgaaccgtttcgagctaccattctcgctctc
cgatctcgaaaccccgacctagctcgcgctatcctccaaacaatagtggcgagtggtggc
cgttatgagactatccttttcagctctaactcttcccctgctcttctcacttatttatgt
acccttgaactcctccaatttaatgatcctacatcgcgagtttggagttttgactcggct
actttgcgtttgcgcgctgaatttttgctttatgttcagactattacgtctagggttttg
gaaactaagaaagtgatcgataatttaggtcaaaatgaaatggatattgccaatctcgat
tcaattaagagagatggaacgggtactagtgagaggcttgaggagtcgagatggggcgcc
agtggaacgagtattagagatattgattcaaaacagcagttcagtgggtcaaaaggggat
accagcgaaatggatattaatgattttgattcaagaactgggcacttagctgaccaggat
gttgccagtgctaaacattgggattttcaggagtgcttgagagtattgaacaaaatctcg
gaggtggggttcaagaggttgaggccagatttgattgaactggacgtcaaagagagtgaa
gaagaggggacctctggtgctactctagagattgaagaaggtgaaatggtgtgtttgagg
ggagtaattttggaaaatgctgttatttttcaggcactgtgtgagaacatatcaaagcag
gtaaagtgggtacaagggaatgatggtggtgatgattcaggtttggctatttcaccaaca
cttcaagaagaggatgttaagtctcttgaattgatacaaagctatgctcagatggtgcat
ttgagtgccatgaaggaatgcttgaaggaaggtaacaatgatggagccatgtcacatatt
caatttcttcactttgattatggtgtggaggaagctgattaccgcatggttttgcaagat
ctcctaaagaggggtttatcaggaatgacggcctatgatgacacctggctttccatgcga
agtaaattgctgtcaatatatgagaaagcactctcatcaaaatcgatacgtcttgtaaac
atgatacagtccatccaggaagaattgttatcagaagagatagagacacataaagttttg
aatggcaaccagattccaccccctcttgcacgacttttaagttttattgcacagatgaca
cctgatccatcgggtgaccaaacatcatcctttaagtcggctatatctgcatgcatgaga
gacatgtatcattatgcccgtatttctgggttgcatgtacttgaatgtgtcatggatgtt
gctctttctgctgtcaaaagggaacaacttcaagaagctagcaatattctttcattatac
ccccaacttcaaccacttgtggctgttatgggttgggatcttttgcctgggaaaacagat
atgagaaggaaattgatgcagcttttgtggactagtaaatcacaaattctaaggctggaa
gaatcttctctttatggtaataaatcagatgaggtgtcttgtgttgaacatctttgtgac
ttcctatgttaccagcttgatctggcttcttttgttgcatgtgtcaattctggacaatca
tggagtttgaaatcatcattactcttgtctggaaaagggaataccaccgagtttgaaaac
caagaattgcagttggatccatttgttgaaaatcttgttcttgaaagattatcgatccat
agcccacttcgagttttgtttgatgtagttccagacataagatttcaagatgctattgag
ttatttagcatgcaaccaatcacctctaatttagcagcctggaaaaggatgaaagatgtt
gaacttatgcacatgcgctatgccatggagtctgctgttcttgccttaagggctatgggg
aatagtaagaataatgaagtaaaaagctaccaaatggcattatgttacttaaaagacctc
aggattcatttggaagctgtcaccaacattccacgcaagataatgatggtgaacattatt
atttcacttttacatctggatgatctttctcgcgactcatcaccctctccgccacctagg
acgcaccccgacacatcatccactagtgaggaaagtggcgatcaatgcaccaatgaagaa
gggaatacaatggtggtatccttcacaggtggactccttaatatactgagacaaaatcta
ccttcaggtgttactgaacaggagattgcaattgacggaaatgtccctactgatgggaga
caagctttagagtggagaatctcaaaagcaagatcttttattgaagattgggaatggcgt
ttatcaatcttgcaaagtcttctgcccttgtctgatcgtcaatggaaatgggaagaggca
tccactgtcttacgtgcagccccatctaagttgcttaatctttgcatgcagagggcaaag
tatgacataggagaagaggctgtaaaccgtttttccctaactccagaagataaagcaact
cttgaactggctgaatgggtggatggagcctttaagagagcatctgctgcagatgctgtt
tctcgtgctgctgatgaaacttctgtcgtccaagacttggatttttccactcttcgctct
caattgggtcctttagttgcgactcttctatgtatcgatgtagctacagcatcttcaaag
tcctcagctttgtctcagaagcttctagatcaggctcaagtcatgttgtcagagatctat
cctggacgtgctcctaaaatgggagctacttattgggaccaaatttatgaaattggaata
atttcagttgtgaagcgtcttctcaaacgtctacaagagttgttggaacaggagaagttt
ccggtacttcaggctcttttaacaggagacctaataagtaccaagaatttccaaaggcaa
ggacctagggagcgtgctctagctatgcttcatcaaatgattcaagatgctcacatgggg
aaacgccagtttcttagtggtaaacttcataatcttgcaagagcgattgctgatgaagaa
tatgaaagagaatttatgagagcagagagcacgtatcctgatgaaaaagatggagttgta
gggcttggattgagacccatgagacaacaatcatcagttgaaaagtcaactgcttctaaa
gaggctgaaaagagaatatatggcccgttgacttcaaaagctacaacatacctttcccaa
tttatcctccatattgcagctattggagacatagttgatgggacagatactacacatgac
ttcaactatttctctctgatatacgaatggcctaaagatcttttgactcgtttggtgttt
gaccgaggtagcactgatgcagctgcaaaagtagctgaaattatgtctgctgattttgta
catgaagtgatttctgcatgtgtacctccaatatatccaccaagatctggtcatggttgg
gcagacatagcagtcatccctacatgtcctaaaagtagttcagagggtaaacttttatcc
ccatcttcaaaagaagccaagccgagttcttattgtccgtcctcagccacacctggagtt
cccctgtaccctcttcagctagatgttgtaaagcatcttgtgaagctgtcaccagtcagg
gctgttttagcatgtgtttttgggaattgtattttatatggtggcaacgactactcatca
accatgtcaggctcattgactgatgggccagggtcagtccagaagcatgatgctgataga
ttgttctttgagtttgcacttgatcaatccgagaggtttccgaccttgaatcggtggata
caaatgcaaactaatcttcaccgagtttcagaggtagctgtaactgctgagcattcggtt
aatgatggaattgaggtgaaaacttctgtgaagaggtttcgggagcatgatagtgattct
gatttagaacatgatgagctggcggcggttggcaccagcagcctttctgttcttacagac
actacaaatgaaagtggtatatggcaagattcacccaagtcagaagctgctgaaattgat
acaacagtttttctctcttttggatgggagaatgaaaaaccgtatgaaaaagctgttgaa
agattgatagaggaaggaaaactaatggatgctcttgctctttctgatcgatgcttacgt
gatggtgcttcagatcatttactgaagttactcattgagcgtgaagaggaaaatcataca
gtattcaatgcttcaagtcactcaaactttagaattccaagcaatagctggcaatattgc
agacgactaaaagataaacaacttgcagcaaaacttgccctcaaatatttgcataggtgg
gaattagatgctgctttagatgttctcaccatgtgtcactgtcacttgctggaaaccgat
ccttccaagaatgaggttgttctcagaagacaagctttgatgcggtacagtcacatatta
tctgcagatgagcgttacaacagctggcaagaggtggaggcagagtgcaaggaagatcca
gaaggtcttgcacttagattagccgaaaagggagctgtttcagctgctttagaagttgct
gaaagtgcagggttatcaattgaccttcgtagagaacttcaggggcgccaactcgtgaaa
cttcttacagcagaccccataacaggtggcggcccagcagaagcttcacggtttctatct
tcccttcgcgattcagaagacgcattaagagttgcaatgggcgcaatgcaacagttgcca
aatcttcgatccaaacaattactcgttcattttttcttgaaaagaaaagacagcaacttg
aacgaaccggagctttcccggcttaatctatgggcgttaggccttcgcgtattggctatt
ttacccttgccatggcagcaaagatgctctgcattacacgaacatccccaactaattctg
gaagttttactaatgcgcaaacaactccattctgcttctttgatacttaaagaattccca
tcattaagggacaacaataaaatatttagatacgctgcaaaagcaattgctgtgactata
gcccctccacgtcgtgagactcggatacaggtgtcaggtcctaaagcaaagcagaaagca
ggaggaactccaacaaaatcttctttttctaatagcttaagtaacttgcaaaaggaggca
cgcagggcgttttcttggaacccaaggaacagtgctgaaaaaacagctcctaaagacgta
caaaggaaaagaaaagggtctggattgacacagactgaaagagctacatgggaggctatg
gctgggattcaagaagatcgtgtttcgtcatacacaatggacggagggcaagatcgtctt
ccttccgtttccattgctgaacagtggatgctcacgggcgacccgaataaagacgaagct
gtccggtcctcgcatcattacgaaagtgcccctgacattattctattcaaggagctgctt
tctctgtgttcagacgagagtacatcagccaaaggtgctttggatttgtgtgttaatcaa
atgagagctgttttaagctccgaaacgttacccgaaaacgcatcaatggaaaccatcggt
cgtgcttatcatgctacagagacatttcttcaggggctcctttacgcgaaatctcaactt
agaaaactttctgtgggaaatgacttttctgtcctttctaaagacatggaggacacgtcc
tctgatgcagggagttctagcatgggcagtcaggctccagatgagctttctgaaacccta
tcacattccgacacctggcttagacgcgcagaacttttgcaaagccttttgggatacgga
attgctgcttcacttgatgatattgctgatgaggaatcttccggaaggttgcgtgatcgg
ttgattctagaagaacgatatagcatggctgtgtatacttgtaagaaatgcaagattgat
gcgtttgctgtgtggaatgcatggggacttgctctaattagaatggaacactacgctcaa
gctcgtgtcaaattcaagcaagcacttcaactgtacaagggtgaccctgctccagttatt
caagatatcattaatacaatcgaaggtggccccccagctgatgtctcatctgttcgttcc
atgtatgaccatttggctaaaagtgcacctgcgatcttggatgattctctttctgctgac
tcgtatctgaatgttttatacatgccatctacttttccacgatcggaaaggtctagaaga
ttgcaagaagcttctaatgaaaattcagttaacagttcagaattcgaagatgatgttcca
cgtagcaatctggatagcattagataccttgaatgtgtcaactatttacaagaatttaca
cgtgaagatttgcttgagtttatgtttagacatggtcattacaaggatgcatgcatgcta
ttttttccggaaaattccgttcctacccctcctcaagtatcatccaccccacaaaaacca
gatcctttatcaaccgactatggatcgattgatgatttgtgtgacctgtgtgttggttat
ggagccatgtctgttctagaagaagtgatggcttctagaatgtcctcggaaacagctgac
gtggcagtgaagcagtatacaggagctgcgctcagccgcatatgcgtgttctgtgaaact
cataaacacttcaactacctatacagattccaggtgatagggaacgatcatgtggctgct
ggactatgttgtatccagttatttgtgaattcatctgctcttgatgaagctataaaacac
ttggaaaatgcaaaaatgcattttgatgaagcgttatcagaaagatacaaaagtggaggc
tcaactaagcttgtgagcaagggtgtacgtgcacaaaaacttacagcagaagggctaatc
aaattttctgcccgagtttccatgcaggtggatgtggttaaatcgtttaatgatacagac
gggcctcaatggaaatactctctttttggaaatccaaacgatgcagaaactttcaggagg
aggtgtgagattgcagaaactctagtggagaagaatttcgacctagctttccaagtgata
tacgagttcaagctttctgctgttgacatatatgctggtgtcgcatcatcccttgctgat
aggaaaaagggcggtcaattgactgaatttttcagaaatatcaagggtacaattgaagat
gacgactgggatcaggttttgggagcagctattaatgtatatgccaacaaacataaagaa
cgacctgatcgtcttattgacatgttaactagcagccacaggaaggttttggcttgtgtg
gtgtgtggtcgtctaaaaagtgcgttccagattgcttctagaagtggaagtgtggctgat
gttcagtatgttgcacatcaggcattacatgcaaatgcacttccagtgctggatatgtgc
aaacaatggctgtctcagtacatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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