KEGG   Lactuca sativa (garden lettuce): 111897556
Entry
111897556         CDS       T05352                                 
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase Pin1
  KO
K09578  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111897556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsv03021]
    111897556
   03110 Chaperones and folding catalysts [BR:lsv03110]
    111897556
Enzymes [BR:lsv01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     111897556
Transcription machinery [BR:lsv03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     111897556
Chaperones and folding catalysts [BR:lsv03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Parvulin
    111897556
SSDB
Motif
Pfam: Rotamase Rotamase_3 Rotamase_2 X8
Other DBs
NCBI-GeneID: 111897556
NCBI-ProteinID: XP_023749282
Position
3:106628307..106629468
AA seq 121 aa
MSSSSSDKVRASHILIKHQGSRRKASWKDPEGRIISSTTREAAVSQLKSLRDDIVSGKSK
FEDVASRYSDCSSAKRGGDLGSFGRNQMQKPFEDATYALKVGEISEIVDTDSGVHIILRT
C
NT seq 366 nt   +upstreamnt  +downstreamnt
atgtcgtcgtcttcatccgataaagttagggcttcgcacatactgataaagcaccaagga
tctcgtcgtaaggcgtcctggaaggatccagaaggtcgaatcatcagcagcaccacaaga
gaggccgctgtgtctcagctcaaatcactccgcgatgacatcgtttctggaaagtcgaag
ttcgaggacgtcgcatctcgttactccgattgcagctctgctaagcgcggtggagatctc
ggatcatttggaaggaaccagatgcagaagccctttgaagatgcaacatacgcattgaag
gttggtgaaataagtgagattgtggacactgacagtggtgttcacatcatcttgagaacc
tgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system